KEGG   Synechococcus sp. WH 8109: Syncc8109_2213
Entry
Syncc8109_2213    CDS       T03783                                 
Symbol
kaiC
Name
(GenBank) putative circadian clock protein KaiC
  KO
K08482  circadian clock protein KaiC
Organism
syh  Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:syh00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    Syncc8109_2213 (kaiC)
SSDB
Motif
Pfam: ATPase AAA_25 AAA_16 DnaB_C AAA_22 GvpD_P-loop AAA_14 SLFN-g3_helicase TrwB_AAD_bind AAA_7 RecA PAXNEB ResIII Sigma54_activat AAA_24 T2SSE AAA_18 AAA_19 NACHT AAA_30 Roc Rad51 MEDS cobW SRP54
Other DBs
NCBI-ProteinID: AHF64542
UniProt: W0GW71
Position
complement(1660521..1662059)
AA seq 512 aa
MQFPPTSGQPQMQVQKLPTGIEGFDDVCQGGLPIGRSTLISGTSGTGKTVFSLHFLHNGI
KQFDEPGIFVTFEESPLDILRNAASFGWNLQEMVEQDKLFILDASPDPDGQDVAGSFDLS
GLIERINYAIRKYKAKRVAIDSITAVFQQYDAVFVVRREIFRLIARLKEIGVTTVMTTER
IDEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTTHMKGEFPFTMGTHGI
SIFPLGAMRLTQRSSNVRVSSGVPRLDDMCGGGFFKDSIILATGATGTGKTMLVSKFLED
ACRNKERAILFAYEESRAQLLRNGTSWGIDFEQMEQDGLLKIICAYPESTGLEDHLQIIK
TEICQFKPSRMAIDSLSALARGVSHNAFRQFVIGVTGYAKQEEIAGFFTNTSEEFMGSHS
ITDSHISTITDTILLLQYVEIRGEMARALNVFKMRGSWHDKGIREFVITGNGPQIKDSFS
NFERIISGVPHRVTTDERSELSRIARGVSTED
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgcagttccccccgaccagcggtcagcctcagatgcaggttcaaaagctcccgacaggg
atcgagggctttgatgatgtatgccagggcggcctgccgatcggccgcagcacgctgatc
agcggcacgtccggcaccggcaagacggtgttttcgctgcacttcctccacaacggcatc
aagcagttcgacgaacccggcatcttcgtcacctttgaggaatcgcccctcgacatcctg
cgcaacgccgccagtttcggctggaacctgcaggagatggtcgagcaggacaaacttttc
atccttgacgcctcaccggatccggacggccaggacgtggccggcagttttgatctctct
ggtttgatcgagcggatcaactacgccatccgcaaatacaaggctaagcgggttgctatc
gactcgatcacggcggtgttccagcagtacgacgctgtgtttgtggtgcgtcgtgagatc
tttcggctgatcgcgaggctcaaggaaatcggcgtcaccacggtgatgaccaccgaacgg
atcgacgagtacggcccgatcgcccgctacggcgttgaggaatttgtgtccgacaacgtg
gtgattctgcgcaacgtgctcgagggagagcggcgtcggcgcacccttgagattctcaag
ctgcggggcaccacccatatgaagggcgagttcccgttcacgatgggaacccacggcatc
agcatcttcccccttggggccatgcgcctaacccagcggtcctccaacgtccgggtcagt
tccggcgtgccgcgcctggatgacatgtgcggcggtggtttcttcaaggactcgatcatc
ctggccaccggagccactggaacgggcaagacgatgctcgtctccaaattcctcgaagac
gcctgccgcaacaaggaacgtgcgatcctttttgcctatgaggaatcgcgggctcagctg
ctgcgcaacggcaccagctggggcatcgacttcgagcagatggagcaggacgggctgctc
aagatcatttgcgcctatcccgaatccacgggccttgaggatcacctgcagatcatcaag
acggagatctgccagttcaaaccgtcgcggatggcgatcgactccctttcggccttggcg
cgcggtgtgagccacaacgccttccgtcagttcgtgatcggggtgaccggttacgccaag
caggaggagatcgccggcttcttcacgaacacctccgaggagttcatgggcagccattcg
atcaccgactcccacatctccacaatcactgacacgatcctgctgctgcagtacgtggag
atccgcggggagatggcccgcgccctcaacgttttcaagatgcgcggttcatggcacgac
aagggcatccgcgaatttgtgatcacgggcaatggtcctcagatcaaggattccttctcc
aacttcgagcggatcatttccggtgtgccccatcgggtcaccaccgatgagcgcagcgag
ttgtcgcgcattgcccgcggcgtctccaccgaggactga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (31)   

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