KEGG   Synechocystis sp. PCC 6803: slr0156
Entry
slr0156           CDS       T00004                                 
Symbol
clpB
Name
(GenBank) ClpB protein
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
syn  Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:syn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:syn03110]
    slr0156 (clpB)
Chaperones and folding catalysts [BR:syn03110]
 Heat shock proteins
  HSP100
   slr0156 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small Clp_N AAA AAA_5 AAA_16 Sigma54_activat AAA_22 nSTAND3 Mg_chelatase IstB_IS21 AAA_14 ATPase_2 RuvB_N AAA_18 TniB AAA_7 Zeta_toxin NACHT AAA_24 ABC_tran Torsin T2SSE DNA_pol3_delta2 AAA_23
Other DBs
NCBI-ProteinID: BAA18560
CyanoBase: slr0156
UniProt: P74459
Position
2194405..2197101
AA seq 898 aa
MQPTDPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDG
EGLRQQLEIFTNRQPKQAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAED
DRVGRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQGKLD
PVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLI
SLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAG
NLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEK
YEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVELEDID
RRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQML
EEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNT
LLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIR
RARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSR
LIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGR
VVDFRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFH
TLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQ
LENPIATKILENTFVAGDKILIDCVDGQLIFDKEIEPTTLPEEPEENITAVEVEVLSS
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgcaacctactgatccaaccaaatttactgaacaagcctgggacgccattgttaaatcc
caagaagtagcccgtcgttataagaacacaaatttggaagtagagcatattctgctggcg
ttgttggagcaggatatgggtttggcggcaaggattttccagcgggcggcggtggatggc
gagggactacggcaacagttggaaattttcaccaaccggcaacccaagcaggcttatgta
gaacaactttacctggggcgtagtttggatgtgatgctagaccgggccgatgccgcccgt
agtagctgggaagataaattcatttccgttgaacatttactggtggggtttgcagaggac
gaccgggtggggcgcaaaaccctccgcgcgtttaaccttgacccccaggatttagagttg
gccatcaaagcgattcgaggttcccaaaaggtgacggagccaaatcaagaagaaaaatat
gaagcgttggataaatacggacgagatctgacggagcaggcccgccagggtaagctagac
ccagtgatcggtcgagatgaggaaattcgtcgagttattcaagtactctctcggcgttcc
aaaaataaccctgtcctgatcggtgaaccgggggtgggcaaaacggcgatcgccgaaggt
ttggcccaacggattatcaatggcgacgtaccagaatcattaaaaaatcggcagttaatt
tccctggatatgggcagtttaattgccggggctaaatatcggggggaatttgaagaaaga
ctgcggtcagtgatgaaggaagtgaccaattccgatgggcaaatcatcttattcattgat
gaagtccataccgtagtgggagccggtggtcgcgaaggttctgggtccatggatgcaggg
aatttgctcaagcccatgttagcccggggggagctgcggtgcattggggccaccacattg
gatgaataccgcaaaaacatcgaaaaagatcctgctttagaaagaagatttcaacaggtt
tacgtcaagcaacctagcgtggatgatacgatttccatcctgcggggtttgaaggaaaaa
tatgaagtacaccatggggtcaaaatcaccgactccgccctagtagcagcagctaccctt
tcccatcgctatatccaagatcgatttttgcccgacaaggcgattgatttagtggacgaa
gcagccgcccgattaaaaatggaaattacttccaaaccggtggaattagaggatattgac
cgacgcttaatgcaactacaaatggaaaaactttccctagaaggggaagaaaaacgtcct
ggtttaggagctgacaaatcttccaaagaaagactagaaaaaattcagcaggaaattact
gaattagagggtcagcaacaggaattatccggtcaatggctgtcggaaaaacagatgctg
gaagaaattaacaccctcaaagaaaaggagcaagagctaagacttcaggtagaaaaagct
gagcgggccactgattgggaaaaggccgccaaaattaagtacggagagttagaagtcctc
caacatgacattgaagaaaaagaaagtaaattactagaaattcaaggctccggtaatact
cttttgcgggaacaggtaacggaatcggacattgccgaaattgtcgccggttggacgggc
atccccatgaaccgtctcatggaaacggaacggcaaaaattattgcaattggaaggtcac
ctccatcagcgagtgatcggtcagaaggaggcagtagcggcagtttctgcggccatacgt
cgggctagggccggcatgaaggaccccagtcgccccattggctcttttctgtttatgggg
cccacgggggtaggtaaaacggaattggctcgggccttggccgggtttctgtttgacagc
gaagaagccatggtgcggattgatatgtccgaatatatggaaaaacacgccgtttcccgt
ttaattggagctccccccggttacgtgggctacgaggaagggggacaattatcggaagca
gtgcgccgtcgtccctattccgttgtgttgttggacgaagtggaaaaagcccatttagac
gtgtttaatattttgctgcaggtcttggatgatggccgcattaccgattcccaggggcgg
gtggtggattttcgcaacaccattatcgtcatgaccagtaacattggcagtgaccatatt
ctcagcctttccgccgatgatgccgactacgacaaaatgcagaaacaggtattacaatcc
ctgcgcaaacatttccgtccggaatttctcaaccgtattgatgatctaattattttccat
acgttgaaacgggatgagttgcgtcgcattgtcgtcctacaaattaaacgcatcgagaag
ttattagacgagcaaaaaatcacgctttctctttccgatgctgccctggatcacatcgtc
agtgctggttacgatcccacctacggagcaagacctttaaaacgtgctattcaacgacag
ttggaaaatcctattgccactaaaatcttagaaaatactttcgttgcaggggacaaaatt
ctcattgattgtgtggatggtcagttaatctttgataaagaaatagagcccacaacatta
ccagaagagccagaagaaaatatcacagcggtggaagtcgaggttctttcttcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (26)   
   Pfam (26)   
All databases (57)   

Download RDF
DBGET integrated database retrieval system