KEGG   Picosynechococcus sp. PCC 7002: SYNPCC7002_A1066
Entry
SYNPCC7002_A1066  CDS       T00664                                 
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
syp  Picosynechococcus sp. PCC 7002
Pathway
syp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SYNPCC7002_A1066 (pnpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syp03019]
    SYNPCC7002_A1066 (pnpA)
   03016 Transfer RNA biogenesis [BR:syp03016]
    SYNPCC7002_A1066 (pnpA)
Enzymes [BR:syp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SYNPCC7002_A1066 (pnpA)
Messenger RNA biogenesis [BR:syp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SYNPCC7002_A1066 (pnpA)
Transfer RNA biogenesis [BR:syp03016]
 Prokaryotic type
  tRNA degradation factors
   SYNPCC7002_A1066 (pnpA)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 KhpA-B_KH
Other DBs
NCBI-ProteinID: ACA99068
CyanoBase: SYNPCC7002_A1066
UniProt: B1XJU0
Position
1090538..1092682
AA seq 714 aa
MQEHIQSISFDGREIRLKTGLFAPQAGGSVLIESGDTAVLVSATTAPGRQGIDFLPLLVD
YEERLYAAGRIPGGYLRREGRPPERATLISRLIDRPMRPLFPQWLRDDIQIVATTLSLDE
EVPPDVLAVTGASVATLLAGLPFYGPMAAVRVGLVGDDFILNPTYREMMNGDLDLVVAGT
PDGVIMVEAGANQLPEADMIEAIDFAYEAIQELIEAQRALMKELGVEMVSAEPPAKDEEL
EKFIGDRTTDKIKKVLSQFDLDKNGRDAALDEIKATEIIEAIEALPEDAPLRLKTTEEPK
LIDNTFKALTKKLMRSQIVEDGVRVDGRKLDQVRPISCRTAVLPRAVHGSGLFNRGLTQV
LSIATLGTPGDAQEMDDLHPSDEKRYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERA
LLPVLPPKDEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIAKPVSGAAMGLIK
EGKEVRILTDIQGIEDFLGDMDFKVAGTADGITALQMDMKITGLAVEVVAEAIKQALPAR
LHILEKMTDVIAEPKELSPAAPRLLTIKIDPDLIGMVIGPGGKTIKGITEQTRAKVDIAD
DGTVTIASSESENAEKAKRLIVNMTRKLNEGDVYFGKVTRIIQIGAFVEIMPGKEGMIHI
SQLAEGRVGKVEDEVAVGDEVVVKVREIDNKGRINLTRLGIHPDEAAAARVAAQ
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgcaagaacatattcagtcgatttctttcgatgggcgagaaattcgactaaaaacaggt
ttgtttgcgcctcaggccggcgggtcagttttaattgaatcaggagatacagcggtttta
gtcagtgcaacgacagcccctggcagacaaggaattgactttctacctttgttggtagat
tacgaagaacggttatacgcagcaggacgaattcccggtggttatttaagaagagaaggc
cgccccccagaacgggcaacgctcatttcgcgcctcattgaccgaccgatgcgcccgcta
tttccccagtggttgcgggacgatattcagattgtcgctacaacgctctccctcgatgaa
gaggtaccgccggatgtcctcgctgtgacgggggcttctgtggccacattgctcgcgggt
ttacctttctacgggccgatggctgccgtccgggttggtctggtgggggatgattttatc
ctcaatcccacgtaccgagaaatgatgaatggggatttagacctcgtagttgctggcacc
cccgacggtgtgatcatggttgaggccggagccaatcagttgccagaagcggacatgatc
gaggcgattgatttcgcctacgaggcgatccaagagttgatcgaagcccaacgcgcgctg
atgaaggaacttggcgttgaaatggtcagcgctgagccacctgctaaggatgaggaactc
gaaaaattcattggcgatcgcaccacggacaagatcaaaaaagtcttgagtcaatttgat
ctcgataaaaatggtcgcgatgccgccctcgatgaaatcaaagcaacagaaatcattgag
gccatcgaagctctgccggaagatgcaccactgcggctgaaaaccacagaagagccgaag
ctcattgataataccttcaaggcgctgacgaaaaagctgatgcggagccaaatcgtcgaa
gatggggttcgggttgatggtcgtaaattggatcaagtgcgccccatttcctgccgcact
gctgtgttaccgagagccgtccatggtagcggtttatttaaccgaggtctgacccaagtt
ttatccattgctaccctcggaacgcctggtgatgcccaagagatggacgatttacatccc
tccgacgaaaagcgctacttgcaccattacaatttccccccctactccgtgggtgaaact
cgcccaatgcgatcgcctggccgccgggagattggccacggtgccttggccgaacgcgcc
cttttacccgtattgccgccgaaggatgaatttccttatgtcattcgggtcgtttctgaa
gtcttatcttccaacggatccacctccatgggttctgtttgtggctctaccctcgcattg
atggatgctggggtgcccattgccaagcccgtgagtggtgccgcgatggggctgatcaaa
gaaggcaaagaagtccgcatcctcaccgatatccaggggattgaagacttcctcggcgac
atggactttaaggttgccgggacagctgacggaattaccgccctccagatggacatgaag
atcactggcctagccgttgaagtggtcgcagaagcgattaagcaagctttacccgctcgt
ctccatatcctcgaaaagatgaccgatgtcattgctgagccgaaggagttgtccccggct
gctccccgtctactcaccattaagattgatcctgatttaattgggatggtcattggcccc
ggtggtaaaaccattaaggggattaccgaacaaacccgtgccaaggtggatattgccgat
gacggtaccgtaacgatcgcctcctctgaatcggaaaatgccgaaaaagccaagcggctg
atcgtaaacatgacccgcaagctcaatgaaggggatgtatatttcggtaaagtcacccgt
attattcagatcggtgcctttgtggaaattatgccgggtaaagaagggatgattcacatt
tcgcaactggcagaaggccgcgtgggcaaagtcgaagatgaagttgctgtcggtgatgaa
gtggtggttaaagtgcgcgaaattgataacaaaggacgcattaatctcacccgcctaggg
atccatcctgatgaagcagccgctgctcgggttgctgctcaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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