KEGG   Synechocystis sp. PCC 6803 GT-I: SYNGTI_0887
Entry
SYNGTI_0887       CDS       T01777                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
syt  Synechocystis sp. PCC 6803 GT-I
Pathway
syt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SYNGTI_0887 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syt03019]
    SYNGTI_0887 (recQ)
   03400 DNA repair and recombination proteins [BR:syt03400]
    SYNGTI_0887 (recQ)
Enzymes [BR:syt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SYNGTI_0887 (recQ)
Messenger RNA biogenesis [BR:syt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SYNGTI_0887 (recQ)
DNA repair and recombination proteins [BR:syt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SYNGTI_0887 (recQ)
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind
Other DBs
NCBI-ProteinID: BAL28634
Position
974155..975591
AA seq 478 aa
MADRQSLEEALRRIWGYDHFRYPQGEVIDCLLARRDCLVVLPTGGGKSICFQLPALLGEG
LTLVVSPLVALMEDQVQSLRRQNLPAACLHSQLSRPERKQVLYQLGQQQLKLLYLSPETL
LSEPVWNLLRQPQVKLQGIMLDEAHCLVQWGDSFRPAYRRLGALRRGLGRDKGQIPLAAF
TATADRQQQNLIVEGLNLRSPECFQVSPHRPQLHLKVKMVLSEYCRRQQLRRFLLKHLQE
SGLIYVRTRTMAINLAQWLQERGFDSEAYHGGLGPHQRRQLEQKWLTGQISSVVCTNAFG
LGIDKPDTRWVLHYQAPLMLMDYLQEVGRAGRDLQPAECLTLVSEPTGWLDSGDRQLRQY
FLSQASKYLQRAEVLSQQIPSQGNLGQLKAHFPDLEMALAWLHRRGNLEWLDPFNYRINP
GHYQANPLEELKSQYRLMTQYLTTSRCRWQTILVAFGDNSPAARRPCGTCDNCLVGRC
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggctgatcgccaatcgttggaagaagctctccgccgaatttggggctatgaccacttt
cgctatccccagggagaagtaattgattgcctattggccaggcgggattgtctggtggta
ctacccactggaggagggaaatctatttgctttcaattgccggcattattgggggaggga
ttaaccctggtggtttcaccgttggtggccctcatggaagaccaggtacaaagtttacgt
aggcaaaatctgcccgccgcctgtctccatagccaattgagtcgccccgaaagaaaacag
gtgttgtaccaattggggcaacagcaactaaagctcctttacctttcgccggaaaccctg
ctgagtgagccagtctggaatttgctccggcaaccccaggtcaaattgcaaggaatcatg
ctcgatgaagcccattgtttggtgcagtggggagatagttttcgtcctgcctaccgccgt
ttgggagccctgcgtcggggattaggcagagacaagggccagattcccctggccgccttc
accgccacagccgatcgccagcaacagaatttgatcgtagaaggattgaatttgcgatcg
ccggagtgttttcaggtcagcccccatcgcccccaactacatctgaaagtcaaaatggtg
ctgagtgaatattgccgccggcaacaattacggcgttttttgctcaagcatctccaggaa
agcggtttgatttacgtccgtacccgcaccatggccatcaacttagcccaatggttgcag
gaacggggctttgacagcgaagcttaccatggcggtttgggcccccaccaacgacgacag
ttggaacaaaaatggttaacggggcaaatttcttcggtggtttgcaccaatgcctttggc
ctgggcatagacaagcccgatacccgttgggtgttacattaccaagcccccctgatgttg
atggattatctccaggaagtgggacgggccggacgagatttgcaaccggcagaatgtctc
accttagttagtgaacccaccggttggttggactctggcgatcgccaattgcgtcagtat
tttttgagtcaagccagcaaatatctacaacgagccgaggtcttgagtcaacaaattcca
tcccagggcaacctagggcaactaaaagcccattttcccgatttggaaatggctctggcg
tggctccaccgtcggggtaatttagagtggttagatccatttaactaccgcattaacccc
ggccattaccaggccaatcccctggaggaattgaaaagccagtatcgcctgatgacccaa
tacctgaccacttcccgttgtcgttggcaaacgattttggttgcctttggtgacaattct
ccggcggcgaggcgaccctgtggcacctgtgataattgtttagttggacgctgctaa

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