KEGG   Thermocrinis albus: Thal_0078
Entry
Thal_0078         CDS       T01179                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
tal  Thermocrinis albus
Pathway
tal02024  Quorum sensing
tal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Thal_0078
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Thal_0078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tal03019]
    Thal_0078
   03036 Chromosome and associated proteins [BR:tal03036]
    Thal_0078
Messenger RNA biogenesis [BR:tal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Thal_0078
Chromosome and associated proteins [BR:tal03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Thal_0078
SSDB
Motif
Pfam: Hfq DUF5608 DUF150_C DUF3683
Other DBs
NCBI-ProteinID: ADC88716
UniProt: D3SNH9
Position
complement(75418..75621)
AA seq 67 aa
MERNANLQDEFIEDCRRKNATVTIFLTRGNRITGKILDHDKYTVLVEVEGEPNLIYKHAI
STIVPSG
NT seq 204 nt   +upstreamnt  +downstreamnt
atggagaggaacgccaacctgcaggatgagttcatagaggactgcaggaggaagaacgct
acggtgaccatattcctcacgcgagggaaccgaataaccggcaagatactggatcacgac
aagtacacagtcctcgtggaggtagaaggggagcctaacctcatatacaaacacgctata
agcaccatagtgccatctggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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