KEGG   Tolumonas auensis: Tola_1548
Entry
Tola_1548         CDS       T00904                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
tau  Tolumonas auensis
Pathway
tau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tola_1548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tau03400]
    Tola_1548
DNA repair and recombination proteins [BR:tau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Tola_1548
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH UVR HHH_5 HHH_2 HHH_3 APC1_3rd GIY_YIG_2 Htt_bridge GIY_YIG_domain
Other DBs
NCBI-ProteinID: ACQ93159
UniProt: C4LEZ2
Position
1714442..1716286
AA seq 614 aa
MKETILPEFDYRRFLKVVTEQPGVYRMTDNTGCIIYVGKAKNLKKRLSSYFRTNVDSAKT
RALVSNIADIQITVTLTETEALILEHNLIKQHRPKYNILLRDDKSYPYIFLSSHPHPRLS
LHRGARKQKGEYFGPYPSGYAVKESLHAMQKIFPIRQCEDSFYANRSRPCLLYQLKRCSG
PCVPGLVSDAQYMEQVNLARMFLQGKDQQVIALLANKMEQASTELRFEDAAKLRDQIQNM
RKIQEQQSVSGNIFDDLDIIGTAIRNGIASVHVLFIRQGKVLGSRNYFPSLPADSDISEL
LYAFVQQFYLSDISGKQLPKEIILDHELEDEDGLSEMLSQISGAKVRITSRTRSERARYC
QLATTNAEAALNSKLAHKTTVEQRFRQLQEILNLTTPVQRMECFDISHTQGEATVASCVV
FDREGPRNSEYRLYNIEGITPGDDYAAMKQALFRRFSKQQDAEKIPDILFIDGGLGQLKQ
AESVVSDLIHLVQKQPLLIGIAKGESRKPGLETLIFGNTHEEIHLPADMPALHLIQHIRD
ESHRFAITGHRQRRNKKRTESLLEKVPGVGAKRRQALLKYLGGMQEIIRATPDELAKVPG
ISPALARVIYDTLH
NT seq 1845 nt   +upstreamnt  +downstreamnt
ttgaaagagactattttgcctgagtttgattaccgcagatttctcaaagtagtaacagaa
cagcccggtgtttaccgaatgaccgataacacgggctgtattatttatgttgggaaagca
aagaatcttaaaaaaagattatcttcctatttccgcactaatgttgatagtgccaaaacc
cgcgcgctggtcagcaacattgccgacattcaaattactgtcaccctcacagaaactgaa
gccctgatacttgaacataatctgatcaagcagcatcgtcctaaatacaatattttactg
cgcgatgataaatcctatccttatatatttttatcctcccatccgcatccccgcctcagc
ctgcaccggggcgccagaaaacaaaaaggtgaatattttggtccctaccctagcggatac
gctgtaaaggaaagtttgcatgcgatgcaaaaaatatttccgatacggcaatgtgaggac
tctttttacgctaatcgttcacgcccgtgtctgctttatcagctgaagcggtgcagtggc
ccctgtgttcccggattggtcagcgatgcacaatatatggaacaggttaatctggcgcgg
atgtttctacagggaaaggatcagcaagttattgcgctgttagccaataaaatggaacag
gccagtactgaattgcgttttgaggatgcggctaaattacgcgatcagatacagaatatg
cgtaaaatccaggagcagcagtctgtcagtggtaacatctttgatgatttagatatcatc
ggcacagcaatcaggaatggcattgccagtgtacatgtcctttttatcagacaagggaaa
gtccttggtagcaggaattatttcccatcgctacctgcagacagcgatatttcagaactg
ctttatgctttcgttcagcaattttatctttctgatatttcaggaaagcagttaccgaaa
gagatcatccttgatcatgagttagaagacgaagatggcctttctgagatgctaagccaa
atttcaggtgccaaagtaagaattaccagccgcacacgtagtgaacgtgcccgttattgt
cagcttgccacaacgaatgcagaagccgcactaaacagcaaactcgcacataaaacaacc
gttgaacaaagattccggcaattacaggaaattctcaacctcaccaccccagtacaacgg
atggaatgctttgatatttcgcatactcagggtgaagcaactgttgcatcctgcgtcgta
ttcgaccgtgaaggaccaagaaacagcgaataccggctgtataatattgaaggtataacg
cctggtgatgattatgctgcaatgaaacaggcattattccgccggttcagcaagcaacaa
gatgcagaaaaaatcccggatatactgtttattgatggtggcttgggacaattaaaacag
gcggaatccgtagtatcagatttgattcatctggtacagaagcaaccccttcttatcggt
atcgctaaaggcgaatcaagaaagccgggattagaaaccctgattttcggaaatacgcat
gaagaaattcacttgcctgcagatatgcccgcattgcatctgatacaacacattcgcgat
gaatctcaccgctttgcgatcactgggcaccggcaacgcagaaataaaaaacgaaccgaa
agtcttctggaaaaagttccgggtgttggagctaaacgtcgacaagctttattaaaatat
cttggcggtatgcaggaaataattcgtgcaacccccgatgaattagcaaaagttccgggt
ataagccctgccttagcacgggtcatttatgataccttacattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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