KEGG   Thiobacillus denitrificans: Tbd_0853
Entry
Tbd_0853          CDS       T00275                                 
Name
(GenBank) pseudouridine synthase, Rsu
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
tbd  Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:tbd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tbd03009]
    Tbd_0853
Enzymes [BR:tbd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     Tbd_0853
Ribosome biogenesis [BR:tbd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Tbd_0853
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AAZ96806
UniProt: Q3SKH5
Position
complement(902371..902913)
AA seq 180 aa
MARLILFNKPYGVLSQFTPEGRWQGLRDHLALPGVYAAGRLDADSEGLLILTDDGPTQAR
IADPRHKLPKTYWAQVEGAPADADLEPLRRGVDLGDFVTRPAGARIIAEPPSLWPRNPPI
RFRANIPTAWIELVIAEGKNRQVRRMTAKVGFPTLRLIRAAVGEWNLNGLQPGQWKELHV
NT seq 543 nt   +upstreamnt  +downstreamnt
gtggcgcgattgattttgttcaacaaaccctatggcgtgctgagccagttcacgcccgag
gggcgctggcagggtttgcgcgatcatctcgcgctgccgggcgtctacgcggcaggacgt
ctggacgccgacagcgaaggcctgctgattttaaccgatgacggcccgacccaagcccgc
atcgccgacccccggcacaagttgccgaagacctactgggcgcaggtggaaggcgcgccg
gccgacgccgacctcgagccgttgcgccgcggtgtcgacctcggcgacttcgtcacccgt
ccggcaggggcgcgcatcatcgccgaaccgcccagcctctggccgcgtaacccgccgatc
cgctttcgcgcgaacattccgacggcctggatcgaacttgtgatcgccgagggcaagaac
cgccaggtgcggcgcatgacggcgaaggtcggctttccgacgctgcgcctgatccgcgcg
gcggtcggcgaatggaatctgaacgggctacagcccggccaatggaaggaactgcatgtc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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