KEGG   Thiobacillus denitrificans: Tbd_1439
Entry
Tbd_1439          CDS       T00275                                 
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
tbd  Thiobacillus denitrificans
Pathway
tbd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tbd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Tbd_1439
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tbd02044]
    Tbd_1439
Secretion system [BR:tbd02044]
 Type II secretion system
  General secretion pathway protein
   Tbd_1439
SSDB
Motif
Pfam: Secretin STN Secretin_N TPR_19 TPR_16 TPR_14 FecR_C type_II_gspD_N0
Other DBs
NCBI-ProteinID: AAZ97392
UniProt: Q3SIY3
Position
1526329..1528299
AA seq 656 aa
MSFHPSPLLTALVAFSLTACAGTGLKEGRKLIDAGQPEAGIARLRTALAEEPDNIKLKAY
YHTQRERIASELLVRAQQDVHAARFDAAETKLDSVLEMHPENPRALALRANLETARRHEA
ALQQANKALAAGKVDAAAQAAREILAQAPGHAGALALLRQTQAAHAPDELAMRRLGPAFH
KPITLEFRDAPLRNVFDMIARQSGLNFVFDKDVRLDTKATLFARNTPIDEAVDMLLMTGQ
LSKKVVNANTLLIYPDQPQKQKAYQELMVKSFYLGNADAKATMAMLRTLVKAKDLHVDER
LNLLVMRDTPDAIRLAERIVAVQDLAEPEVMLEVEVLEVKRGRLLDLGIQYPTNFSLLNL
PPATSSTIGPGGVVTNTTPPPSVLTVESLKNITASQIAISPTPGVDLRKQDSDVNILANP
RIRVKNREKAKIHIGDKVPVITSNTTSTGVVSESVSYLDVGLKLDVEPSVLMREDVQIRV
GLEVSNIVREIRSGNGTLTYQIGTRNAGTTLRLKDGETQVLAGLISDEDRSTASRIPGLG
DLPLIGRLFSSQRDERNKTEIVLLITPRVLRSDATRLPALTEFRGGTENAIGGGGAVPFS
APALPEASQPPLPDEGPTSPSAIAPAPESEIPPAPDTFGTPSVPVPQIPAPPDAAD
NT seq 1971 nt   +upstreamnt  +downstreamnt
ttgtccttccatccgtcgcccttgctcaccgcgctggtcgcgttcagcctgaccgcgtgc
gcaggcaccggtctcaaggagggccgcaagctgatcgacgccgggcagcccgaggccggg
atcgcgcgcctgcgcaccgccctggccgaagaacccgacaacatcaagctcaaggcctac
taccatacgcagcgcgagcgcatcgccagcgaactattggtgcgggcgcaacaggatgtc
cacgccgcacgcttcgacgcggccgaaaccaagctcgacagcgtgctcgaaatgcatccg
gaaaatccgcgcgcgctcgccctgcgcgccaatctcgagacggcgcgccgccacgaagcg
gccttgcagcaggcgaacaaggcgctcgccgcgggtaaggtcgacgcggccgcgcaggct
gcgcgcgagatcctcgcgcaggcgccggggcatgccggcgcgcttgccctgctgcggcag
acccaggccgcgcacgcgcccgacgaactcgcgatgcgccggctcggcccggcctttcac
aaaccgatcacgctggaatttcgcgacgcgccgctgcgcaacgtcttcgacatgatcgcc
cgccagtccggcctcaacttcgttttcgacaaggatgtccgtctcgacaccaaggccacg
ctgttcgcgcgcaacacgccgatcgacgaggccgtcgacatgctcctgatgaccgggcag
ctgtcgaaaaaggtggtcaacgccaacacgctgttgatttatcccgaccagccgcagaag
cagaaggcctaccaggagctgatggtgaaaagcttctacctcggcaacgccgacgccaag
gcgacgatggcaatgctgcgcacgctggtcaaggcgaaggacctgcacgtcgacgaacgg
ctcaacctgctggtcatgcgcgacacgcccgatgcgatccgtctcgccgagcgcatcgtc
gccgtgcaggacctggccgagcccgaggtcatgctcgaggtcgaggtgctcgaagtgaag
cgcgggcgcctgctcgacctcggcatccagtacccgaccaatttcagcctgctcaacctg
ccgccggcgacgagttcgaccatcggccccggcggggtcgtcaccaatacgaccccgccg
ccatcggtgctgaccgtcgagagcctgaagaacatcacggcgagccagatcgcgatcagc
ccgacgcccggcgtcgacctcagaaagcaggacagcgacgtcaacatcctcgccaatccg
cgcatccgcgtgaagaaccgcgaaaaggccaagatccacatcggcgacaaggtgccggtg
atcacgtccaacacgacgtcgaccggcgtcgtctccgaatcggtgtcgtatctcgacgtc
ggcctcaagctcgacgtcgaaccgagcgtgctgatgcgcgaggacgtgcagatccgcgtc
ggcctcgaggtttccaacatcgtgcgcgagatccgcagcggcaacggcacgctgacctac
cagatcgggacgcgcaacgccggcacgacgctgcgcctgaaggacggcgagacccaggtg
ctcgccggcctgatctcggacgaggaccgcagcacggcgagccgcattcccgggctcggc
gatctgccgctgatcggccgcctgttttcgagccagcgcgacgagcgcaacaagaccgaa
atcgtgcttctgatcacgccgcgggtgctgcgcagcgacgcgacgcggctgcccgcactg
accgaattccggggcggcaccgagaacgcgatcggcggcggcggcgccgtgccgttcagc
gcgccggccctgcccgaagcgtcgcagccgccgctgcccgacgaaggcccgacctcgccg
tcggcgattgcacccgcgcccgagtcggagatcccgccggcgcccgacacgttcgggacg
ccgagcgtgcctgtcccacagattcccgcaccgccggacgcggccgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

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