KEGG   Thiobacillus denitrificans: Tbd_2568
Entry
Tbd_2568          CDS       T00275                                 
Name
(GenBank) porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
tbd  Thiobacillus denitrificans
Pathway
tbd00860  Porphyrin metabolism
tbd01100  Metabolic pathways
tbd01110  Biosynthesis of secondary metabolites
tbd01120  Microbial metabolism in diverse environments
tbd01240  Biosynthesis of cofactors
Module
tbd_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
tbd_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:tbd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Tbd_2568
Enzymes [BR:tbd01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     Tbd_2568
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC LysR_substrate SBP_bac_3
Other DBs
NCBI-ProteinID: AAZ98521
UniProt: Q3SFT5
Position
complement(2642187..2643107)
AA seq 306 aa
MHTLTIASRESALAMWQAEHIRDRLRELHPECKVNILGMTTRGDQILDVTLSKIGGKGLF
VKELEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPG
SVVGTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGAR
IKSLLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSC
QVPLGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAV
LDALPA
NT seq 921 nt   +upstreamnt  +downstreamnt
atgcacaccttgaccatcgcctctcgtgaaagtgccctcgccatgtggcaggcggagcac
attcgtgaccgcctgcgcgaattgcacccggagtgtaaggtcaacatccttggtatgacc
acgcgcggcgatcagattctcgacgtgacgctgtcgaaaatcggcgggaagggcctgttt
gtcaaggaactcgaggtcgcgctcgcggcgggcgaggccgacctcgcggtgcattcgatg
aaggacgtgccgatggaattgccgcccggtttcgagctcgccgtgatcggcgagcgcgag
gacccgcgcgacgccttcgtgtcgaatcgctacgcgcggctctcggacctgccgccgggc
agcgtcgtcggcacgtcgagcctgcgccgcgaagcgcagttgcgcgcgcgctatccgcac
ctcacggtcaagccgctgcgcggcaacgtcggcacgcggctgaaaaaactcgacgaaggc
cagttcgacgcgatcctgctcgctgcggccggtctcaagcggctcgggctcggcgcccgc
atcaagagcctgctgtcggtcgaggagagcattccggccgctggccagggcgcgctcggc
atcgaaatccgcagcggcaacacggccgtggcggcgatgctggcgccgttgaacgatccc
gtaaccgcagcctgcgtgcgcgccgagcgccaagtcagccgcgtgcttggcggaagttgc
caggtgccgctcggggcgcacgcgtcatacaaggacgggcgcctgctgctcgagggcttc
gtcgccaagcccgacggcagccgcttccttgtcgaccgtgccgagggcgacgcgagcgat
cccgaggcggtcggtcaggcgctggccgacaagctgctggcgcagggtgcgcgcgcggtc
ctcgacgccttgccggcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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