KEGG   Trypanosoma brucei brucei: Tb10.6k15.3210
Entry
Tb10.6k15.3210    CDS       T01013                                 
Name
(RefSeq) exosome complex exonuclease RRP41A
  KO
K11600  exosome complex component RRP41
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tb10.6k15.3210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbr03019]
    Tb10.6k15.3210
Messenger RNA biogenesis [BR:tbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Tb10.6k15.3210
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Tb10.6k15.3210
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 3662451
NCBI-ProteinID: XP_822980
UniProt: Q38AL8
Position
10:complement(1857535..1858293)
AA seq 252 aa
MPVIKEYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVS
NRLEGKYNEVTITCDVVVAAFAGERRREQQRYSRLSEDISASVLDVARSVVLLSQYPNSQ
IHICIEVLKQDGSDKAACINAACLALIDASIAMKDVVYTQTVGLIEGFDVVDLTTEEIHS
QCPSICITVQGHDPTNIVWMESNSRLAPEVITRLVKVAQKASTDVFETALRGPLEEHAAT
VLRLQANLGNIE
NT seq 759 nt   +upstreamnt  +downstreamnt
atgcctgtgattaaggagtacatcaatcccgctgggctacgcttggacgggcgccgacca
aacgagccgcggcggctagcgttagagttcgggaagatttcaggctgcgacggctgctgt
acggtggtgagtggactatcgcatgtctgtgccactgtttacggtcccagggaagtttcc
aaccgcttggaggggaaatataatgaggtgacaataacctgtgatgttgttgtcgctgcc
ttcgccggagagcgcaggcgcgaacagcagcggtactcaaggctctctgaggatattagc
gcatcagtactggatgttgctcgctctgttgtgttgttatcgcagtatccaaactcacag
attcacatttgcattgaggtgcttaaacaggatggtagtgacaaggctgcttgtatcaat
gcagcgtgtttggcccttatcgatgcaagcattgccatgaaggatgttgtgtacacgcaa
acagtggggctgatagagggctttgacgttgtggacctcaccacagaggaaatacactcg
caatgcccctctatatgcataacggtgcagggacacgatcccactaacatagtgtggatg
gagtcgaatagccgtctcgcgccggaagtaattaccagacttgtaaaagtggcgcagaaa
gcctcgactgacgtgtttgaaaccgcgcttcggggtccgctggaggagcacgccgctacg
gttctccgattgcaagcgaatttaggtaacatcgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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