KEGG   Tribolium castaneum (red flour beetle): 661345
Entry
661345            CDS       T01046                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    661345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tca03041]
    661345
Enzymes [BR:tca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     661345
Spliceosome [BR:tca03041]
 Complex C
  Other components
   Step II factors
    661345
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C S1 HA2_N AAA_22 DEAD AAA_19 Flavi_DEAD nSTAND3 AAA_30 FMP27-BLTP2_C Sigma54_activ_2 T2SSE UvrD-helicase TsaE AAA_16
Other DBs
NCBI-GeneID: 661345
NCBI-ProteinID: XP_008198238
UniProt: D6WZK3
Position
LG9:complement(13105849..13110484)
AA seq 1181 aa
MNEVEKLEYLSLVSKVCTELENHLGMNDKDLAEFIIHLSEKHDTVDSFKKVLVENGAEFS
DSFVSNLLRIIQHMRPKKSSQASKVNSSHEQDSLAAKFPGLALPNEVQKPLTPVVETKGE
DEDIVADLMAQLEADAPSQAKNDKEKRERSRSPERKRRRREKSRSRSRDRRRRSRERSGR
RRRSRSRSRRRRSRSASPRRRDRSASPRRRDRKIKRESPELDEDPIPGKIYTGKVANIVP
FGCFVQLEGLRRRWEGLVHISQLRAEGRVTNVSEVVSRGMKVKIKVLSVTGQKVSLSMKD
VDQITGKDLNPLSHAPAEREDKDRNPDRPMNTGTSVLRLPVGIDENEENSRKRVTRISSP
ERWEIKQMISSGCIDKSELPDFDDETGLLPKDEDGEADIEIELVEDEPPFLQGHGRALHD
LSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEIDSQPSGKNKNWIDPLPEDES
KMNSARGIGLQSQDLPEWKKHVIGGKKSSFGKKTNLSILEQRQSLPIYKLKEELRKAVTD
NQILIVIGETGSGKTTQITQYLAESGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ
EVGYTIRFEDCTSPETIIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHERTIHTDVLFGL
LKQAVTKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDAS
LITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEM
QTRIFEPAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPIS
QAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDL
LHFDFMDAPPVESLIMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQ
CSDEILTIVSMLSVQNVFYRPKDKQAIADQKKAKFNQPEGDHLTLLAVYNSWKNNKFSNA
WCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAERNTVRVQKCVCSGFFRNAAKKDP
QEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAF
FKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgaacgaagttgaaaaactagaatatttatccctcgtatctaaagtatgcaccgaattg
gaaaaccatctcgggatgaacgacaaggatttagccgagttcataatccacctctccgaa
aagcacgacactgtcgacagcttcaagaaagtccttgtcgagaatggtgctgaattttcc
gactctttcgtctcaaatttgctccgtattatccaacacatgcgccccaaaaaatcaagt
caggcgagtaaagtgaactcgagtcatgaacaggattcactagctgcgaaattcccgggt
ttggcgttaccgaacgaggtgcaaaaacccctcacaccagtggtggagaccaagggggaa
gatgaggatattgtggctgatttgatggctcagttggaggctgatgccccctcacaggcg
aaaaatgataaggagaagagggaaagaagtcggagtcctgagaggaagcggcgcaggagg
gaaaagtccaggtccaggtcgagagataggaggaggaggtcgagggagaggtctgggagg
aggcgcaggagccggagcaggtcgcggaggaggaggagcaggagtgcgtccccgaggagg
agggacaggagtgcctccccaaggaggagggacaggaaaatcaagcgggagagtccggaa
ttggacgaagatccaatccctggaaaaatttacacaggaaaagtggcaaacattgtccct
ttcggttgctttgtccagttggagggtttacggcgccgttgggaaggtctagtgcatatt
tcgcaattaagggctgaaggtcgcgtcacaaacgtctctgaggtcgtttcacgtggaatg
aaagtcaaaataaaagtactatcagtaaccggacaaaaagtctccttatcaatgaaagac
gttgatcaaataaccggaaaagacctcaatcccctttcacacgcccctgcagaacgtgaa
gataaagaccggaacccggatcgtccaatgaacaccggaacttccgttttgcgccttcct
gtcggcatcgacgaaaacgaggaaaactcccgcaaacgtgtcacccggatttcgagtccg
gaacgctgggaaatcaaacaaatgatttcgtccgggtgtatcgataagagtgagttgccg
gatttcgacgacgaaaccggacttttgcccaaggatgaagacggagaggctgatattgag
attgagttggttgaggacgagcctcctttcctccaaggtcacgggagggcgctccacgac
ttgagtcccgtccgtattgtgaaaaacccagacggttcgttggctcaagccgcaatgatg
caatcagctttggcgaaagaacgtcgtgagcaaaaaatgttgcaacgagaacaggaaatt
gattcgcaaccgtctgggaaaaataaaaactggattgatccactgcccgaggatgagagt
aaaatgaattcggcacgtgggattggtttacaatcgcaggatttacccgaatggaagaaa
cacgtaataggggggaagaaatcttcgtttgggaaaaaaaccaatttgagtattttggag
cagaggcagagtctgcccatctataagttgaaggaagagttgaggaaagctgtgaccgat
aatcagattttgatagtgattggggagacagggtctgggaaaacgactcaaatcacgcag
tatttggcggagagtgggttcacagccagggggaaaattgggtgtacgcagcctaggagg
gtggctgccatgtcggtggccaagagggtggccgaggagtttgggtgtaggttgggccag
gaggtgggctatacgattcggtttgaggattgcacaagtccagaaacgatcatcaaatac
atgacggacggcatgttgcttcgtgagtgcctcatggacctcgacctcaaggcctactcg
gtcataatgttggacgaagcccacgaacgcaccattcacaccgacgtcctctttggcctc
ctcaaacaggccgttacgaaacgtcccgaactcaaactaatcgtgacatcggcaaccctc
gacgccgttaaattctcacaatattttttcgaagccccaatttttacaattccaggccgg
acatttcccgtcgaagtcctctacacgaaagaacccgaaacggattatctggacgcaagt
ctaatcaccgttatgcaaatccatttacgggaaccccccggcgatatacttttgtttcta
accggacaggaagaaatcgacacggcttgcgaaattttatacgaacgtatgaaatcatta
ggaccggatgtccccgaattgattatacttccggtgtattcggcgcttccgtccgagatg
caaacccggatttttgaaccggcgccccccggaagccggaaagttgtcatcgcgacaaat
atagcagagacttcgttgaccattgatgggattttttacgttgtcgatcccggttttgtc
aaacagaaagtttataattctaaaactgggatggactcgttggtggtcacgcccatttcg
caggcacaagccaagcaaagggcggggcgtgccgggcggacggggcctgggaaatgctat
aggttgtacacggagagggcgtatcgtgatgagatgctgcccactcctgttccggagata
caaaggaccaatttggcaacgactgtcttacagttgaaaacaatggggattaatgatttg
ctacattttgattttatggacgctccgcctgttgaatcgctgattatggccttagagcag
ttgcactcgttgtcggcgttggatgatgaggggcttcttacgcgattagggcggaggatg
gctgagtttcctctggaacccaacctatcaaaaatgctgattatgtccgtggcccttcaa
tgttccgacgagattttgacaattgtgagcatgttgtcggttcaaaatgtcttttatcgt
cccaaggacaagcaagcgatcgccgatcagaaaaaggccaaatttaaccaaccagaaggc
gaccacttgacacttttggccgtttataacagttggaaaaataataaattttcgaatgcg
tggtgttacgaaaatttcgtacaaataaggacgttaaaacgggcacaagatgttcgtaaa
caattgttagggattatggataggcacaagttggatgtcgtatcggctgaaagaaataca
gtgagggtgcagaagtgtgtgtgttcgggatttttcaggaatgcagcgaaaaaggatcca
caggaggggtacaggacgctggtggatagccaagtggtttatatacacccctcgagcgcc
ctcttcaacagacaaccagagtgggtgatctaccacgaactggtgcagaccacgaaggaa
tacatgcgcgaagtgaccacaatcgacccaaaatggctcgtggagttcgcccccgctttc
ttcaaattctcagatccgacaaaactgagcaaatttaagaaaaaccaacgtttggagcca
ctttacaacaaatacgaggaaccgaacgcttggcgaatatcgcgagttaggaggcggcgt
aattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (141)   
   KEGG ORTHOLOGY (1)   
   RefGene (137)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (166)   

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