KEGG   Theobroma cacao (cacao): 18592303
Entry
18592303          CDS       T02994                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tcc04131]
    18592303
   04121 Ubiquitin system [BR:tcc04121]
    18592303
Enzymes [BR:tcc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18592303
Membrane trafficking [BR:tcc04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    18592303
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    18592303
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-RING_11 zf-RING_UBOX zf-C3HC4 zf-rbx1 zf-ANAPC11 zf-Nse zf-C3HC4_3 zf-RING_5 Vps39_2 Anti-TRAP
Other DBs
NCBI-GeneID: 18592303
NCBI-ProteinID: XP_017981735
Position
8:6261141..6263254
AA seq 385 aa
MLCCFHYNDLLTKFKTKKKKKRLKTKKKIMSLSPPRARVNGTNGAAPERNYQLYWCYNCH
QAVRIASTNPSEIICPRCFGQFVCEMEINRPRMVVDFTAFDPSPEARLLEALSLILDPPP
IRLFNRNHSDNQEPRGWPWLMRRSNLLDSEPGNRPPERLHRRRSRSSDGSDHREAEHDAL
PRRPRTWIIVRPMGPFRPGTAEPTLPEENPVRPGLDPRNFFLGQGLNELIEQITQNDQPG
APPAPESTIDAIPTVKITDTHLSNDSQCPVCKEEFKVGGEARELPCNHIYHSDCIVPWLR
LHNSCPVCRQELPISSDEPSSSEYLFEPEGSPEVSSRDGRRCWRLRQMASNLWPFRRRYQ
RINPRSDRIGASPAVESGSHRCCIL
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgttatgttgtttccattataatgatttattaaccaaatttaagaccaaaaaaaaaaaa
aaacgtctgaaaaccaagaagaagatcatgtctctaagcccacctagagcaagggtcaat
ggcaccaatggagcagccccagagagaaactaccagctttactggtgctataattgccat
caagctgtccggattgcctctacaaatccttcagagattatctgccctcgatgttttggg
cagttcgtttgtgagatggaaatcaacaggccaagaatggttgttgatttcactgctttt
gatccctcccctgaagcccgcctgcttgaagcactctctctcatcctggatcctcctcca
atcaggctattcaatcgtaatcattctgataaccaagaacctcgaggctggccttggctc
atgcgtcggagcaatttactagactctgaacctggaaataggcccccagagcgtcttcat
aggcgtagaagccgtagttctgatggaagtgatcatagagaagcagaacatgatgctcta
cctcgtcgtcctaggacttggattattgttagacccatgggtccttttcgtccaggcact
gcggaaccaactttgccagaagaaaaccctgtacgccctggtcttgatccaagaaacttc
tttttaggacaaggactgaatgagttgattgagcaaataacacaaaatgaccagccaggt
gcacccccagctccagagtcaacaatcgatgcaattccaaccgtgaagatcacggacacg
cacttaagtaatgactcgcaatgtccagtttgtaaggaggaattcaaggttggtggagag
gcaagggagttgccttgtaaccatatataccatagtgattgcatcgtgccttggctaagg
cttcacaattcctgccctgtttgccgccaggagttaccgatcagtagtgatgaaccttct
agcagtgagtatttgttcgaacctgaaggttcgcccgaggtttcttccagagatggcaga
agatgttggaggcttaggcagatggctagtaatttgtggccttttcgtcgacggtatcag
agaattaatcctcggagtgacagaattggtgcttctcctgcagttgaatcagggtcgcat
cgttgctgcattctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (56)   

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