KEGG   Trypanosoma cruzi: 508277.180
Entry
508277.180        CDS       T01012                                 
Name
(RefSeq) mismatch repair protein MSH3
  KO
K08736  DNA mismatch repair protein MSH3
Organism
tcr  Trypanosoma cruzi
Pathway
tcr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    508277.180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcr03400]
    508277.180
DNA repair and recombination proteins [BR:tcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     508277.180
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV FliD_N
Other DBs
NCBI-GeneID: 3552893
NCBI-ProteinID: XP_820278
UniProt: Q4E0X8
AA seq 942 aa
MGKRQRDAEAEAAAVRHAIELICQRPVKDTEVKAVTLTPLEKQVVCLKESLPPDVVLMVA
CGYRVKFYGRDSRVASRRLGIMCIGTTPFESSSVPYVRVNLYVHRLVAMGYRVAFADQEN
ASIRATSGTAKGIFTREITRVCSRGTLLPSEVIGVANPAKTTNSNGVSSVDTADVAEAGA
EDDEAEPEGVNFPMKEESSELFMCFIKAPSPSSLPAAAGAPAMDVTLVSFVTYAVTRHRI
ASEVELLDVLHRYDIVEVILLCAPPQGENAKDNLFSPKSSPLRCLPEVYASCLNDVLPLH
FGPTINGEEDDRSISLSVFEWVGSIDETIASYLAPYRLNRVYEKMCLEAGQTLPRNAAID
SVTGKMELPGSTLSALDIFHSSIGAKGSLMALLDHSLTTPGVRRLRLWLSEPPCEMNTIT
ARRNAVSFLLHGEDDNTVTHLLRECARFGDIEATLGKMRAQRCSVAEYIQLLRALEKAHT
LAHAVLSRNDGRIDNLILETLQRVTSAETANFIQLCKCEMESHATSPLEYFTSHGVSVPS
AMQTHLTARDEALHALDEELEYIRQTLRMPDLEYRTIAGTPFIVDVPQAKCNRVPKDWLV
LTRTKSHVRFHTPNIVDRNVSLCSARERLLIAAKEAWQQKQDELSNSSLAMNAFQAVIDA
VAVLDAIRCLTVTSSSRGYVAPELSDGATCLKIVGGRHPVLDNILRGGYVSCDFCLAKGG
AWILTGPNMGGKSALMRMVGAFVIMAQLGCYVPATAAQLPLFTAVYCRMGASDSLLEGTS
TFLKEMQETSRILRSPRVSSSLVLLDELGRGTSSFDGIAVAAATLEYLLQRGTTMLFVTH
YSHLCEPYLHNTSEGKQVSCYYMGFSEEQDEEGEDREPKLVFTYKPTPGVTPSSFGVRVA
RMAGLPHDVVAEAQRLSEMEEREHMTRMALMRLRRFVNAPST
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgggcaagcgacagcgggatgccgaggcggaagcggcggcagttcggcatgccattgag
ttgatatgccaacgccccgtgaaggatacggaggtgaaagcggtcacactgacgcccctt
gagaagcaggtggtttgtctcaaggaatctctaccgcccgatgtggtgctgatggttgcg
tgcggttatcgtgtaaagttctacggccgcgatagccgcgtggcgagccgtcgtttgggt
atcatgtgcattggtaccaccccgtttgagtcgagcagtgtaccgtatgtgcgagtaaac
ctgtacgttcaccgccttgtggccatgggttaccgggtggcgtttgctgaccaagaaaac
gcttccattcgcgcaaccagtgggaccgcgaagggtattttcacccgagaaatcacacgt
gtgtgcagccgaggaacactactcccgtccgaggtgattggtgtcgctaacccggcgaag
acgacgaattcaaatggtgtttcgtctgtggatacggcagatgtcgcagaggccggggcg
gaggatgacgaagcggaaccagaaggagtgaattttcccatgaaggaagaatcatccgag
ttgttcatgtgttttataaaggcaccatcgccatcatcattgccggcagcagcaggagct
cccgcgatggatgtcacacttgtcagctttgttacttacgccgtgacacgccaccgcatt
gcatcggaggtggaactcttggacgtgttgcaccgctacgacattgtggaggtgattctt
ctctgcgcgcccccccaaggggagaatgcgaaggacaacttattttcgcccaaatcctcc
ccgctgcggtgcttgccggaggtgtacgcctcttgtttgaatgacgtgctgccgctgcac
tttggccccaccattaacggagaggaggacgaccggtcgatctccctcagtgtgttcgag
tgggtcggttccatagacgagacgattgcaagttatcttgccccttatcggttgaataga
gtgtatgagaagatgtgcttggaggctggtcagacgttgccacggaatgctgccatcgac
agtgtgacgggaaaaatggagttgccgggtagcacgttgagcgcgctggatatttttcac
agcagcatcggggccaaaggctctttgatggcgcttcttgaccacagtctcactacgcct
ggtgtacgacgccttcgtctgtggctgtcggaaccgccttgtgaaatgaacacaatcaca
gcacgccgaaacgccgtttctttcttgttgcacggagaggatgataacaccgtgacgcat
ttgcttcgggagtgtgcccggtttggcgatattgaggcaacactgggaaagatgcgggcg
caacgctgctcagttgcagagtacattcaacttctgcgtgctctggaaaaagcccacact
ttggctcatgccgtattatcccgcaatgacgggcgcatagataatttaattctcgagact
ctgcagagggtcacttccgcggaaacggccaattttattcagttgtgcaaatgtgaaatg
gaatcacacgcgacatccccattagagtactttacatcgcatggtgtttctgttccttct
gctatgcagacccacctaacggctcgtgatgaggcattacatgcccttgatgaggagctg
gagtacattcgccagacactgcgtatgcctgatttggagtatcgcaccatcgctgggacg
ccatttattgtggacgtgccacaagcaaagtgtaatcgtgtaccaaaggattggttagtg
ctgacacggacaaaaagtcatgttcgatttcacaccccaaacattgttgatcgtaatgtt
tcactttgttctgcccgagagcgtcttcttattgcagcaaaagaagcatggcaacaaaag
caggatgaattgtcaaactcttccttagccatgaatgcctttcaggctgtcatcgatgct
gtggccgtgctggatgcgattcggtgccttactgtgacatcttcttcccgtggctacgtt
gcaccggagctctcagatggtgcaacgtgtctgaagattgtgggcggtcggcacccagtg
ctggacaacattttacggggaggctacgtgagctgcgatttttgcctggcaaaaggtggg
gcatggatcctaacaggacccaatatgggtggcaagtctgcacttatgcgcatggttggc
gcatttgttatcatggcccagctgggttgctacgttcctgcgactgcggcacagttgcca
ttgttcacagccgtatattgtcgtatgggggcaagtgactctctactggagggaacctct
acgtttttgaaggagatgcaagagacaagccgaattctgcgctcgccacgtgtatcctcc
tcacttgtattgttggatgaacttggtaggggtacaagcagctttgacggtattgccgtt
gctgcggcaacgcttgaatatcttttgcaacgaggcacgacgatgctgtttgtgacgcat
tactcacatctatgtgagccgtaccttcataatacctccgagggaaaacaagtatcgtgc
tattatatggggttttctgaggagcaagatgaagaaggagaagatagggagcccaaactg
gtgtttacctacaagcctacaccgggtgtaacaccgtctagttttggggtgcgggtagca
cgcatggcgggacttccgcatgatgttgtggcggaagcacagcggctcagtgaaatggag
gagcgagaacacatgacacggatggcactgatgcgtctgcgtcgctttgtcaatgcgcct
tccacctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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