KEGG   Hydrogenovibrio crunogenus: Tcr_0012
Entry
Tcr_0012          CDS       T00296                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
tcx  Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:tcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcx03032]
    Tcr_0012
   03400 DNA repair and recombination proteins [BR:tcx03400]
    Tcr_0012
Enzymes [BR:tcx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Tcr_0012
DNA replication proteins [BR:tcx03032]
 Prokaryotic type
  DNA Topoisomerases
   Tcr_0012
DNA repair and recombination proteins [BR:tcx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Tcr_0012
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: ABB40609
UniProt: Q31JR4
Position
13889..16330
AA seq 813 aa
MTQEAENPIQPEYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNGIDEAL
AGHCDKVVVTIHTDGSVSVTDNGRGIPVGLHEEEGVSAAEVIMTVLHAGGKFDDNSYKVS
GGLHGVGVSVVNALSEELHLTIKREGHVWKQTYRHGVPDEPLKAVSETDETGTEIRFLPS
RETFTQTEFSFDYLLKRLRELSFLNSGVHIELLDKRDDRHEVFEFEGGIRAFVDYINANK
TPINQEAFYFSTVRDDITVEVAMQWSEAYQESIFCFTNNIPQRDGGTHLSGFRAALTRTL
NQYAEKEGLTKKYKMSVSGDDAREGLAAVISVKVPDPKFSSQTKDKLVSSEVKTAVETAM
NEKLAEYLLENPKDAQSVFAKIVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEK
DPARSELYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLASAEVGTLITA
LGCGIGHEEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPP
LYKVKKGKQEAYLKDDAELENYLLQSALDQAALWTSKETPAIQGVALETLAKSFLQTNRI
IDRLARRFSKTFLELMLDLSPIHVETLNDYDACEKWIADALPRLRAIGEIQKVEYQLQVE
PALQGETQFQIRLQQREHGTLTSQIYDEDFFAAAEYDHIAKVAKQLKGLLSETAYIQRGE
KQENVSSFKEAMDWLLSEAKRGQSIQRYKGLGEMNPEQLWETTMNAEARRLLQVTISDAI
TADQVFTTLMGDEVEPRRNFIESNALKAENIDV
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgactcaagaagctgaaaatccgatccaaccagaatacgattcttcctcgattaaggtt
cttaaaggactcgacgccgttcgtaaacgtcctggaatgtatattggtgataccgatgat
ggcaccggtctgcatcatatggttttcgaagtggtggataacgggatcgatgaagccctc
gccgggcattgcgataaagttgttgtcaccattcataccgacggctctgtctcagtcacc
gataacggtcgaggcattccggttggacttcatgaagaagaaggcgtttcagcggccgaa
gtcattatgaccgtccttcatgccggtgggaaattcgatgataactcctataaagtgtcg
ggtggtttgcacggggttggggtctcggtcgttaacgccttatccgaagagcttcattta
acgattaaacgagaaggccatgtttggaaacaaacgtatcgtcacggcgtgccagacgaa
cctttaaaagcggtttcggaaacagatgaaaccggtacggaaattcgtttcctacccagt
agagaaacgtttactcaaacagaattcagttttgattacttattaaaacgtcttcgtgag
ctttctttcctgaactccggggttcacatcgagctcttggataaacgcgatgatcgccat
gaagtctttgaatttgaaggtggcattcgagcattcgttgattacatcaacgctaataaa
actccaattaaccaagaagcgttttatttttcaaccgttagggacgacattacggttgaa
gtcgccatgcaatggtcagaggcttaccaagaatctattttctgtttcaccaataacatc
cctcaaagagacggtggaacgcatttatccggtttccgtgcggcccttacacgtacgctg
aaccaatatgctgaaaaagaaggcctaacgaaaaaatacaaaatgagtgtgtcgggtgac
gatgcgcgtgaaggacttgccgcggttatttcggtcaaggtaccagatccaaaattctca
tcacaaaccaaagacaagctcgtttcatctgaagtcaaaacagccgttgaaacggctatg
aacgaaaaactggctgaatatctattggaaaacccaaaagatgctcaatcggtctttgcg
aaaattgtagatgcagcccgtgcgcgtgaagcggctcgtaaagcacgtgaaatgacgcgc
cgtaaaggggctcttgatattgcagggttgcctggaaaactggcagactgtcaagaaaaa
gaccctgcacgatcagaactttacctagtggagggtgactcagcgggcggttcggccaaa
caagggcgtgatcgtcgtactcaagccatcctgccgttaaaagggaaaatcctgaacgtt
gaaaaagcacgttttgataaaatgctggcgtcggccgaagtcggtaccttgatcaccgcg
ttaggttgtgggatcggacatgaagaatacaacccagacaaactgcgttatcaccgcatt
atcattatgacggatgctgatgtggatggttctcacattcgaacgcttttattaacattc
ttctatcgccaaatgccggagctaatcgaacgcggttacatctatatcgctcagcctcct
ctttacaaggtgaaaaaaggtaagcaagaagcttacttaaaagacgatgccgagctggaa
aactatttactgcaatcggctttagatcaggctgcattatggacgtcaaaagagacccct
gccattcagggcgtagcgctggaaacgttagcgaaaagcttcttgcaaaccaaccgcatc
attgatcgtctggcacgccgtttcagcaaaacattcctggaattgatgttggatttaagt
ccgattcacgttgagaccttaaatgattatgatgcctgtgaaaaatggattgctgacgcg
ttaccacgcttgagagccattggagaaatccaaaaggttgagtaccagcttcaagtggaa
ccggctttacaaggtgaaacacagttccaaatccgtttacagcagcgtgagcatggcact
ttaacctcacaaatttatgatgaagatttcttcgcagcagcggaatatgaccacattgcc
aaggtggcgaagcagctgaaagggctgttgtccgaaaccgcttatatccaacgtggtgaa
aaacaagaaaatgtttcaagctttaaagaagcgatggattggttgctcagtgaagcgaaa
cgcggtcaaagcatccagcgttataaaggtttgggggaaatgaacccagagcaattatgg
gaaacaaccatgaatgcggaagccagacgtttattacaagtcactatttcagatgccatt
acagcagaccaagtgtttacaacgctgatgggagatgaagtggaaccacgtcgtaacttc
attgaatccaatgcattaaaagctgaaaacattgatgtgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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