KEGG   Tenacibaculum todarodis: LPB136_09475
Entry
LPB136_09475      CDS       T04588                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
ten  Tenacibaculum todarodis
Pathway
ten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ten00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LPB136_09475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ten03400]
    LPB136_09475
DNA repair and recombination proteins [BR:ten03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LPB136_09475
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_2 HHH_5 GIY_YIG_2 Pox_polyA_pol_N UVR
Other DBs
NCBI-ProteinID: APG65576
UniProt: A0A1L3JK88
Position
2090466..2092262
AA seq 598 aa
MPTPLELQLKTLPNSPGVYQYFDKDDGILYVGKAKNLKKRVTSYFTKNHENGKTRVLVKK
IVSIKHIVVNTETDALLLENSLIKKHKPRYNILLKDDKTYPWICIKKERFPRIFLTRNVI
KDGSEYFGPYTSVRTVRALLDLIKEIYPLRTCAFDLHPEKISTGKYKVCLEYHLGNCKGA
CEGLQTEGNYQQEITAIRSIIKGNFRETLAKFKEMMFDFAEKMEFEEAQKIKEKLDLLAN
YQAKSTVVNPTINNVDVFSIISDETHGYVNFFKIANGSIIQSYTTEIKKKLDESDKELLE
LFIIETRQRFNSQSKEIYVPFKVDVGENTKVTVPKLGDKRRIVELSERNAKYYRMEQFKQ
IKIVDPDRHVKRIMAQMKKDLRLSEEPRHIECFDNSNIQGTNPTSACVVFKNGKPSKKDY
RHYNIKTVEGPDDFASMEEVVYRRYKRLLAEDEPLPQLIIIDGGKGQLSSALKSLDILGL
RGKIAIIGIAKRLEEIYYPGDSVPLYLDKKSESLKIIQYLRNEAHRFSLTLHRNKRSKSA
IQSELEQIPDVGKQTITTLLRKFKSAKRVKTATLDELSSEIGNARAKKVYEYFNQKKQ
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgccaactccattagaacttcaactaaaaacactaccaaattcacctggtgtttatcaa
tattttgataaagacgatggaattttatacgttggtaaagctaaaaacttaaaaaaacgt
gttacttcctacttcaccaagaatcacgaaaatggtaaaacacgtgttttagtaaagaaa
attgtcagcataaaacatattgttgttaatactgagactgacgcattattattggaaaac
agcttaattaaaaagcacaaacctcgttacaatattcttttaaaagatgataaaacatat
ccttggatttgtattaaaaaagaacgtttcccaagaatatttttaactcgaaatgtaata
aaagatggttctgaatattttggaccttacacttccgtaagaaccgttagagccttgcta
gatttgataaaagaaatttatccgttaagaacttgtgcttttgatttacatccagaaaaa
attagcacaggaaaatataaagtctgcttagagtatcatttaggaaactgtaaaggtgct
tgtgaaggtttgcaaactgaaggaaattatcagcaagaaataacagcaattagaagtatt
attaaagggaattttagagaaactctggcgaaattcaaggaaatgatgtttgattttgct
gaaaaaatggaatttgaagaggctcaaaaaattaaagaaaaattagatttactggctaat
taccaagcaaaatctaccgttgtaaacccaacgataaataatgtagatgttttttctatt
atttctgatgaaacacacggttatgttaacttttttaagattgcaaacggttctataatt
caatcttacactacagaaattaagaaaaaattagatgaatctgataaagagttactagaa
ctttttattattgaaacgcgccaacgattcaattctcaatctaaagaaatttatgttcct
tttaaggttgatgtaggcgaaaacacaaaagtaaccgttccaaaattaggtgataaaagg
cgtattgttgagttatcagaaagaaatgctaagtattatcgcatggaacagtttaagcaa
ataaaaattgttgatccagatcgtcatgtaaaaaggattatggcgcaaatgaaaaaggat
ttacgtctttctgaagaaccaagacatattgaatgttttgacaattctaacattcaagga
accaatcccacttctgcttgtgtagtatttaaaaacggaaaaccgagtaagaaagattac
agacattacaatataaaaacggttgaaggtccagatgattttgcttccatggaagaagta
gtttacagacgttacaagcgtttacttgcagaagacgaacctttaccgcaattaataatt
attgatggtggaaaaggacaactttcatctgctttaaaaagtttagatattttaggttta
cgtgggaaaattgcgataatcggaattgcaaaacgattagaggaaatttattatccagga
gattcggttccgttgtatttagacaagaaatcagaatcacttaaaattatacaatattta
cgtaatgaagcgcatcgatttagcttaacattacatagaaacaaaaggagtaaaagtgct
attcaatctgaattagagcaaattcctgatgttggcaagcaaactattacaactttatta
cgtaaatttaaatcggctaagcgtgttaaaactgctactttagatgaactttcttcagaa
attggtaacgcaagagctaaaaaagtatacgaatatttcaaccaaaaaaagcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system