KEGG T04688: RPIT

Tessaracoccus flavus: RPIT_04065

Entry

RPIT_04065        CDS       T04688

Name

(GenBank) DNA-binding protein

K06204

RNA polymerase-binding transcription factor

Organism

tfl Tessaracoccus flavus

Brite

KEGG Orthology (KO) [BR:tfl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tfl03000]
    RPIT_04065
   03021 Transcription machinery [BR:tfl03021]
    RPIT_04065
   03009 Ribosome biogenesis [BR:tfl03009]
    RPIT_04065
Transcription factors [BR:tfl03000]
Prokaryotic type
  Other transcription factors
   Others
    RPIT_04065
Transcription machinery [BR:tfl03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     RPIT_04065
Ribosome biogenesis [BR:tfl03009]
Prokaryotic type
  rRNA transcription factors
   RPIT_04065

SSDB

Motif

Pfam:

zf-dskA_traR PspA_IM30 zf_C2H2_13 DUF1192 DUF4140 CCDC-167 RIC3 NuA4

Other DBs

NCBI-ProteinID:

AQP44089

UniProt:

A0A1Q2CD98

Position

908843..909271

AA seq 142 aa
MPTSKKATAPEAVALPVLEGEEPWTAEEVAEQRAELKDELERLERRIAQTEAELAAILRG
GTDGAGRDPADVGSSNFERDQELSLAQNVRDMAEQLRLAIHLFDKGEYGLCESCGQPIGK
GRLQVFPRATMCVACKQREERR

NT seq 429 nt +upstreamnt +downstreamnt
atgccgacgtcgaagaaagccaccgcccccgaggcggttgcgctccccgtgctcgagggg
gaagagccgtggacggccgaggaggtcgcagagcagcgcgccgagctcaaggatgaactc
gagcggttggaacggcgcatcgcgcagaccgaggcggagctggcggccatcctccgcggc
gggaccgacggagccggccgggatcccgccgacgtcggctccagcaacttcgagcgcgac
caggaactgtccctggcccagaacgtgcgtgacatggcagagcagctgcgcctagccatc
cacttgttcgacaagggcgaatacggcctctgcgagtcctgcggacagccgatcggcaag
ggccgacttcaggtcttcccgcgagcgacgatgtgtgtggcgtgcaagcagcgcgaggaa
cgacgctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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