KEGG   Thermococcus gammatolerans: TGAM_1454
Entry
TGAM_1454         CDS       T00920                                 
Name
(GenBank) SAM-dependent tRNA/rRNA cytosine-C5 methylase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
tga  Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:tga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tga03009]
    TGAM_1454
Enzymes [BR:tga01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     TGAM_1454
Ribosome biogenesis [BR:tga03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    TGAM_1454
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB Methyltransf_31 PCMT Ubie_methyltran Methyltransf_25 MTS FtsJ Methyltransf_12 Methyltr_RsmF_N Met_10 Methyltransf_11 Fibrillarin NSUN5_fdxn-like
Other DBs
NCBI-ProteinID: ACS33956
UniProt: C5A6U4
Position
complement(1363326..1364681)
AA seq 451 aa
MELFYKVSFQEVVADALSLVEERELSSKHALERVFRKVAGKDREKARGLAHAYVFEIEKW
RAKIDFIINSVLKGSKVEDLDPYLANLLRIGTFEIHFRKVPPAIATDSIIRVVKERFDFS
RAKFVNALMHSIEKFDVERALKRLKERDRIEWLSVRFSHPRWYVEYVIELLGYDEAVRLL
LSNNRPQRYYVRANTLKTDMDSLRDYLEENGVRTALTPVPDVLKVLDYKTPVTRLDWYKE
GKFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAASLMENKGEIVAVDYSYDRLM
RMKEKMKILGIKNVKLVHADGQSFRDKAKFDRIILDAPCSSSGTYRQFPEVKWRFDERKI
KRIISVQRNMLRNAYENLRDGGVMTYSTCSIRIDEDEENVLFAVEKVGLELLPYDFSWGD
RGFLEIGDRVFRAWTHRHDCNSFFIAKMGRQ
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggagctgttttacaaggtgagctttcaggaagtcgttgcggacgctttgagcttggtt
gaggagcgcgagctttcatcgaagcacgcccttgagcgggtcttccggaaggttgctgga
aaggacagggagaaagctcgtggattggctcacgcctatgtctttgagattgagaagtgg
agggccaagatagacttcatcatcaactccgtgctgaagggttcgaaggtggaagacctt
gacccctatttggctaatctcctccgcatcgggacgtttgaaatccactttcggaaggtt
ccgcccgccatagctaccgactctataatcagggtcgttaaggagcgctttgatttctcg
agggcgaagttcgtcaacgcgctgatgcactcgatagagaagttcgacgtcgagagggct
ttaaaacggctcaaggagagggacaggatagaatggctctccgtccgcttctcccacccg
cgctggtacgtcgaatacgtgatagagcttttaggctacgacgaagctgtaaggcttctt
ctcagcaacaacaggccgcagaggtactacgtccgcgcgaacaccctcaagaccgacatg
gactcgctgagggattaccttgaggagaacggcgtgaggacggctttaactcctgttccg
gacgttttgaaggttcttgactataagacgccggtaacgaggctcgactggtacaaagag
gggaagtttgtcattcaagatttggcctctgcctacgtcgcccacgttctcaatccagag
ccgggcgagagggtccttgatttggccgctgcccctggttcaaaaaccttccatgccgcc
tcattgatggagaacaaaggcgaaatagtcgcggtggactactcctacgacaggctcatg
cgcatgaaggagaagatgaagattctgggcatcaaaaacgtcaagctcgtccacgcggac
ggccagagcttcagggataaggccaagttcgataggataatcctcgacgcgccgtgctca
agctccggaacctacagacagttcccagaggtcaagtggcgcttcgacgagaggaaaatt
aagcgcataataagcgtccagaggaacatgctccgcaacgcgtacgagaacctccgcgat
ggcggggtgatgacttactcgacgtgctcgataaggatcgatgaagacgaggagaacgtc
ctcttcgccgtcgagaaggttggattggagcttctcccctacgatttcagctggggtgat
aggggcttcctcgaaatcggcgatagagtcttccgcgcgtggacgcacaggcacgactgc
aacagcttcttcatagcgaagatgggcaggcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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