KEGG T00840: Tgr7

Thioalkalivibrio sulfidiphilus: Tgr7_0665

Entry

Tgr7_0665         CDS       T00840

Name

(GenBank) ATP-dependent helicase protein, putative

K03579

ATP-dependent RNA helicase HrpB [EC:5.6.2.6]

Organism

tgr Thioalkalivibrio sulfidiphilus

Brite

KEGG Orthology (KO) [BR:tgr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgr03019]
    Tgr7_0665
Enzymes [BR:tgr01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Tgr7_0665
Messenger RNA biogenesis [BR:tgr03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Tgr7_0665

SSDB

Motif

Pfam:

HrpB_C Helicase_C DEAD HA2_N GDPD AAA_11 AAA_19

Other DBs

NCBI-ProteinID:

ACL71758

UniProt:

B8GMC6

Position

complement(715700..718198)

AA seq 832 aa
MRVKPKPLPVETSLPELQQALASRGMALLQAPPGAGKTTRVPPALLESPWCTGRILLLEP
RRLAARAAARRMAAERGERPGETVGLTTRLDRLTGPQTRIEVITEGILTRRLQRDPSLEG
VSAVIFDEFHERSLQADLGLALCLQARELLHPELRLLVMSATLDATGVARLMGDAPVITS
EGRSYTVDIHYRGPAPEPRAPAPAVTAAVTDALAHHPGDLLVFLPGRREIEQVARALEGR
TGAGTRIRPLYGQLPPEAQDAAITPAPEGERKVVLATDIAETSLTIEGIRVVVDSGLARR
PVFDPRTGLTRLATVRISQASAEQRRGRAGRLGPGVCIRLWNEEATSRMRPHTPPEILEA
DLAPLALTLACWGAEADELAWLDAPPAAPLDQGRELLQGLGALDETFKVTDHGRALDALG
THPRLGHMLLGARDRGLGHTACLLAALQEERDPLPRDAGSDLRLRLQALTTPRGGHGGAL
KRIRTQAGRWMKQLDIRSNEPVEAQAAGLLLALAYPDRIALRRPGGEARFLLSGGRGARL
LEGDDLSASDCLVAAVLDGAGRDAVIRLAAPLERADLEARLPELISEREQVSWDEGQGAA
VARKERRLGALVLDSRPMDTVPPQAMTALLLQAIRERGLSCLPWTAENERLRERMAFMHR
LAVAGGESAAWPEVSDAALLDTLEDWLGPWLTGMSRLSHLRRLDLSAALLGLLDWPRQQR
LNSLAPERFTVPSGSGIRIDYSDPEAPVLAVRIQEVFGLTRTPMIGGDKVPLTLHLLSPA
QRPVQVTRDLAGFWARTYGEVKKDLKGRYPKHYWPDDPMQAVAVRGVKRSGK

NT seq 2499 nt +upstreamnt +downstreamnt
atgcgagtcaagcccaagcccctgcccgtggaaaccagcctgccggagctgcagcaagcc
ctggcgtcccggggcatggccctgttgcaggcgccccccggcgcgggcaagaccacccgt
gtgcccccggccctgctggaatcgccctggtgcaccggccggatactgctgctggagccc
cggcgcctggcggcccgggccgcggcccggcgcatggccgccgagcggggtgaacgcccg
ggtgagaccgtgggactgaccacccgcctggaccgactgaccggcccacagacccgcatc
gaggtgatcaccgagggcatcctcacccgtcgtctgcagcgggacccttccctggaaggg
gtgagcgcggtgatcttcgatgaatttcacgagcgcagcctgcaggcggacctgggcctg
gccctgtgtctgcaggcccgggaactgctgcacccggagctgcgcctgctggtgatgtcg
gccaccctggacgcgacgggcgtggcacggctcatgggggacgccccggtgatcaccagc
gaggggcgcagctacacggtggatatccactaccggggtcccgccccggaaccccgggcg
ccggccccggcggtgaccgccgccgtgaccgatgccctggcacatcatcccggcgacctg
ctggtattcctgccgggccgccgggagatcgaacaggtcgcacgggcgctggaaggtcgc
acgggtgccgggacccggatccgccccctgtatggccagctgccccccgaggcccaggac
gccgccatcaccccggcccccgagggggaacgcaaggtggtactggccacggacatcgcc
gagaccagcctgaccatcgagggcatccgcgtggtggtggattcaggcctggcccggcgc
cctgtcttcgacccgcgcaccggacttacccggctcgccaccgtgcgcatcagccaggcc
agcgccgaacaacgccgtggccgcgccggccgtctgggtcccggggtgtgcatccggttg
tggaacgaagaggccacctcgcgcatgcgcccgcacacgccgcccgagatcctggaggcg
gacctggcgcccctggccctgaccctggcctgctggggcgcagaggccgatgagctggcc
tggctggacgccccgcccgccgccccactcgaccagggccgggaactgctccagggcctg
ggcgccctggatgaaaccttcaaggtgaccgaccacggacgggccctggatgccctgggc
acccatccgcgcctggggcacatgctgctgggcgcccgggacagaggcctgggccacacc
gcctgcctgctggccgccctgcaggaagaacgggatcccctgccccgggatgccggcagc
gacctgcgtctgcgcctgcaggccctcaccaccccacggggaggccacggcggggcgctc
aagcgtatccgcacccaggccggacgctggatgaagcagctggatatccgcagcaatgag
cccgtggaggcgcaggccgccggcctgttgctggccctggcctacccggaccgcatcgcc
ctgcgccggcccggcggggaggcccggttcctgctctccgggggccggggcgcacgactg
ctggaaggggatgacctgagtgccagcgactgcctggtggccgcagtgctggacggcgcc
ggccgggacgcggtgatccgactggccgcaccccttgaacgggcggacctcgaagcccga
ctcccggaactgatcagcgagcgggaacaggtcagctgggacgagggccagggggccgcc
gttgccagaaaggaacgccggcttggggcactggtactggacagccggccgatggatacg
gtcccgccccaggccatgaccgcgctgctgctacaggccatccgcgagcggggcctgtcc
tgcctgccctggacggcggaaaacgaacgtctgcgggaacgcatggcatttatgcatcgt
ctggccgtggccggcggggagtccgctgcatggcccgaggtcagcgacgccgccctgctg
gacaccctggaagactggctcggcccctggctgacaggcatgagccgcctcagccacctg
cgtcgcctggacctgtccgccgccctgctgggccttctggactggccccggcagcagcgt
ctcaacagtctggccccggaacgattcaccgtacccagcggatcgggcatccgcatcgac
tacagcgaccctgaagcaccggtactggcggtacgcatccaggaggtcttcgggctcacc
cgaacaccgatgatcggcggcgacaaggtgccgctcaccctgcacctgctgtcaccggca
cagcggcccgtgcaggtaacccgtgacctggcagggttctgggcaaggacctacggagaa
gtaaagaaagacctgaaggggcgctaccccaagcattactggccagacgacccgatgcag
gcggtggcggtgaggggggttaaacgaagtgggaagtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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