KEGG   Taeniopygia guttata (zebra finch): 100217927
Entry
100217927         CDS       T01082                                 
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X4
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tgu04040]
    100217927 (SCN2A)
Ion channels [BR:tgu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100217927 (SCN2A)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQCJ-SCHIP1 IQ ATP-synt_B Neur_chan_memb FUT8_N_cat
Other DBs
NCBI-GeneID: 100217927
NCBI-ProteinID: XP_002197631
Ensembl: ENSTGUG00000007152
Position
7:12835895..12911248
AA seq 2007 aa
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSI
GENGTFINATMTTFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSIASMLTNTMEEL
EESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYVK
RKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVDIGKNLAYLKDGNGTTSGI
GSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDVGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVEEGKGKIWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFDIS
QINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVL
DQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQSED
MENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPHKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAYRR
HLLRQKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTPSTTSPPSYDSV
TKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq 6024 nt   +upstreamnt  +downstreamnt
atggcacaatcagtgctggtaccaccaggacccgacagcttccgctacttcacaagagag
tcgcttgcagctattgaacagcgtatcaatgaagagaaagctaaaaaatccaaacaagag
cgcaaagatgatgatgatgaagatggcccgaagccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattaaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttctccgtgacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaaaactattgtaggagcc
ctgattcagtctgtgaagaagctctcggatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttccatctttaatagctccata
ggtgaaaatggtacatttattaatgcaacaatgacaacatttaactgggatgaatacatc
gaagacaaaagtcatttctacttcttggaaggacaaaatgatgcgctgctatgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgactctgcgtgctgctgggaagaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgataaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaacaatggaagaagctgag
cagaaagaggcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcggcggcggcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagaacagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacgagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggagaa
agacgcaacagtaacattagccaggccagtaggtcatccagaacagtacctgcacttcca
gcaaacgggaagatgcacagcactgtggactgcaatggagtggtttccttggttggtggg
ccgccagctttgacatcacctacaggacagcttctgccagagggcactactacagaaact
gacttaagaaagagacactctagttcttaccatgttcctatggactacctaacagaccca
agtgcaaggcaaagagcaatgagtatagccagcatgcttacaaacacaatggaagaactg
gaagaatccagacagaaatgtccgccatgctggtataaatttgctaacacttgcttgatt
tgggactgctgtactccctggctgaaagtcaaacatattgtaaatttgattgtgatggac
ccatttgttgatctggccattaccatctgcattgtcctgaacaccctgttcatggccatg
gaacactacccaatgacagaacagtttagtggtgtgctttcagtaggaaaccttgtgttt
actggaattttcacagcagaaatgtttctcaagataattgccatggatccttattattat
ttccaagagggctggaatatttttgatggctttattgtgagtcttagtttaatggaactt
ggccttgcaaatgtagaaggattatctgtccttcgatcgttccgattgcttcgagttttc
aaattggcaaaatcttggccaactctaaatatgctgattaagattattggcaactcagtg
ggggctctggggaatctgaccctggtgctggccatcattgtgttcatttttgctgtggtt
gggatgcagctctttgggaagagctacaaggaatgtgtctgcaagatctccagtgactgt
gaacttcctcgctggcacatgcacgacttcttccactctttcctgattgtattccgagtg
ctgtgtggagaatggatagaaaccatgtgggactgcatggaggttgcaggccaaaccatg
tgccttacagtcttcatgatggtcatggtgattggaaacctagtggtactcaacctattt
ctggccttgctgctgagctcatttagttcagacaaccttgctgctaccgatgatgataat
gaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagattatgtgaag
agaaaagtgcgtgaattcatccaaaaagcttttgttagaaaacagaaagttttagatgaa
atcaaacctcttgaagacctaaacaataaaaaagacagctgtatttccaaccatacaata
gtagacataggtaaaaaccttgcctatctcaaagatgggaatggaactaccagtggcata
ggcagcagtgtggaaaaatatgttgttgatgaaagtgattacatgtcattcataaacaac
ccaagtctcaccgtgacagtgcccattgctgttggagaatcagattttgaaaatttaaac
acagaggagttcagcagtgaatcagacctggaagaaagcaaagagaaattgaatgcatcc
agttcatcagaaggcagcacagttgatgttggactacctccagaaggtgaacagccagaa
gcagaacctgaagaagttctagagccagaagcttgttttacagaagggtgtgtacggaga
ttcaaatgctgtcaagtcagtgtagaagaaggaaaggggaaaatctggtggaatcttagg
aaaacctgctataagattgttgaacacaactggtttgagaccttcatagtcttcatgatt
cttctcagcagcggtgctctggcatttgaagatatctacatagagcaacgtaaaactatc
aagaccatgctggaatatgctgacaaagttttcacctatatcttcatcctggaaatgctt
ttaaaatgggttgcttatggctttcaaacctatttcactaatgcatggtgctggctggac
ttcctgattgttgatgtctctttggttagcttaacagctaatgccttgggctactcagaa
cttggtgcgattaaatcccttaggacactaagagctttgagacctctaagagccttgtcg
cgatttgaagggatgagggttgtggtgaatgccctgttaggagcaattccctctataatg
aatgtgcttcttgtttgccttatattctggctgatatttagtatcatgggagtaaatcta
tttgctggaaagttttactactgtgttaacactacaactgacgagagatttgatatcagc
caaattaacaacttcagtcaatgtgaggagctcatacaaaacaatgaaactgcccggtgg
aagaatgtgaaggttaactttgacaatgtaggccttggatacctttctctgctccaagtg
gctacatttaaaggatggatggatatcatgtacgcagctgtggattctcgtaatgttttg
gatcagccaaagtatgaagataacctgtacatgtatctttactttgtcatctttatcatc
tttggatcattttttaccttgaacctttttatcggtgtcatcatagacaatttcaaccag
cagaaaaagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactac
aatgcaatgaaaaaattgggttcaaagaaaccacaaaagcctatacctcgaccagcaaac
aaattccaaggcatggtctttgattttgtaacaaaacaagcatttgatatcagtatcatg
atacttatctgccttaacatggtcacaatgatggtagaaacagatgatcagagtgaagac
atggaaaacattttatattggattaacctggtgtttattgtccttttcactggagaattt
gtcctgaaattgatttcacttcgtcattactactttactataggttggaatatttttgat
tttgtggttgtcattctctccatagtaggtatgtttttggctgagatgatcgagaagtac
tttgtatctcccacactattcagagtcatccggcttgccagaatcggtcgaatcctgcgc
ctcattaaaggcgctaagggaatccgcactctgctcttcgctttgatgatgtctcttcct
gctctgttcaacattgggctgctgctcttcctggtcatgttcatctatgcgatatttggc
atgtccaactttgcctatgtcaagagggaagttgggattgatgacatgttcaactttgaa
acgtttggcaacagcatgatctgcctgtttcagatcaccacctccgctggctgggacggt
ttgctcgccccaattctcaacagtggggagccagactgtgacccccataaagatcatcca
gggagctctgtgaaaggtgactgtggcaacccttctgttgggattttcttctttgtcagc
tacattatcatatccttcctggtagtggtgaacatgtacattgctgtgattttggagaac
ttcagtgttgctactgaagaaagtgctgaacctttgagcgaggatgactttgagatgttc
tatgaagtctgggagaagtttgatcccgatgcaacacaattcatagagttcagtaaatta
tcagattttgcagcttcattagatccacctcttctcatagcaaaaccaaacaaagtccag
ctgattgcaatggatctgcccatggtgagtggtgacagaattcactgccttgacatcttg
tttgctttcacaaagcgtgttttgggggaaagtggggagatggatgccctcagaatacag
atggaagatcggtttatggcagccaatccttccaaagtctcctatgaaccaattacaacc
acactgaaacgaaagcaggaggaggtgtccgctgtcatcattcagcgcgcttacagacgt
cacctcttaaggcaaaaagtcaaaaaagtatcatgtatatttagtcaggataaaggtaaa
gaggaagatgatctgcccatgaaagaagatatgattatggataaactaaatgagaactcc
actccagaaaaaacagacatgaccccatccacaacctccccaccttcttatgacagtgta
acaaagccagacaaggataaatatgaaaaagacaagtcagaaaaagaagataaaggtaaa
gacagcagggaaagtaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (10)   
   Pfam (10)   
All databases (43)   

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