KEGG   Taeniopygia guttata (zebra finch): 100224098
Entry
100224098         CDS       T01082                                 
Symbol
SEMA3F
Name
(RefSeq) semaphorin-3F isoform X1
  KO
K06840  semaphorin 3
Organism
tgu  Taeniopygia guttata (zebra finch)
SSDB
Motif
Pfam: Sema ig Ig_3 I-set Ig_2 PSI Ig_6 V-set C2-set VP4_haemagglut
Other DBs
NCBI-GeneID: 100224098
NCBI-ProteinID: XP_030138965
Ensembl: ENSTGUG00000006464
Position
12:complement(13963171..13984559)
AA seq 781 aa
MPVVGVLLWATLLTLGWRAAHPKDHGFATPRVQLSFKELKATGTAHFFNFLLNSSDYRIL
LKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWPASQQRIEECILSGKNSNGECGNFIR
LIQPWNRTHLYVCGTGAYNPICAFVNRGRKAQGFPPSQPGGRESRSTDSPLSPRPAQSKD
YIFYLEPDKLESGKGKCSYDPKVDTVSALINEELYAGVYIDFMGTDAAIFRTMGKQTAMR
TDQYNSRWLNDPAFVRAQLIPDSSERNDDKLYFFFREKSADAPLSPGVYSRIGRICLNDD
GGHCCLVNKWSTFLKARLVCSVPGPDGIETHFDELQDVFIQQTQDTKNPVIYAVFSASGS
VFKGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPYTGKMPYPRPGTCPGGTFTPSMKST
KDYPDEVINFMRAHPLMYHAVYPTHRQPLVVRTNVNYRFTTVAVDQVDAADGRYEVLFLG
TDRGTVQKVIVLPRDDMETEELMLEEIEVFKVPAPIKTMTISSKRQQLYVSSAVGVTHLA
LHRCDVYGEACADCCLARDPYCAWDGSACTRYSASSKRRSRRQDVRHGNPIRQCRGYNSN
ANKNTVEAVQYGVEGSTAFLECQPRSPQASVKWLLQKDNSDRRKELRVEGRVLRTEQGLL
LRALQLGDSGLYSCTATENNFKHTVTKVQLRVLSSRAVHTVLVQAEPPPGLPGAPTPRYQ
DLLQLLTQPEMGLLDQYCQGYWRHTAASPPQPLAGLKAKEQQEQKKPRNRRNHQPETYGH
T
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgcccgtggtcggtgtcctgctctgggccaccctgctgactctgggctggcgcgctgcc
caccccaaggaccacggcttcgctacccccagggttcagctctccttcaaagagctgaag
gcgacgggcacagcacacttcttcaacttcctcctcaactccagtgactaccgcatcctg
ctgaaggatgaggaccacgaccgcatgtacgtgggcagcaaggactacgtcctctcgctg
gacctgcacgacatcaaccgcgagcccctcatcatccattggcccgcgtcccagcagagg
atcgaggaatgcatcctatcaggcaagaacagtaatggggagtgcggcaacttcatccgc
ctgatccagccctggaaccggacacacctctacgtgtgtggcactggcgcctacaacccc
atctgtgccttcgtcaaccgcgggcgcaaagcccaggggttcccgccgagccagccggga
ggccgggaaagcagatccaccgacagccccctcagcccgagaccagcacaaagcaaggat
tatatcttctacctggagccagacaagctggagtcgggcaaggggaagtgttcctacgac
cccaaagtagacaccgtctctgcattaataaatgaagagctttatgccggtgtctacatc
gacttcatgggcacggacgcagccatcttccgcaccatgggcaagcagacagccatgagg
acagaccagtacaactcccgctggctcaatgacccagcctttgtccgtgcccagctcatc
cccgacagcagcgagaggaatgatgacaagctctacttcttcttccgagagaagtcggct
gatgccccgctgagtcctggggtctattcccgcatcgggcgcatctgcctgaatgacgac
gggggccactgctgccttgtgaacaagtggagcaccttcctgaaggcccggctcgtctgc
tctgtgccgggacccgatggaatcgaaacgcacttcgacgagctccaggacgtcttcatc
cagcagactcaagacaccaagaaccctgttatctacgctgtgttctctgcttcggggtcg
gtcttcaaaggctctgctgtgtgtgtctactcgatggctgacatccgtatggtcttcaat
gggccctttgcccacaaggagggacccaactaccagtggatgccctacacaggaaaaatg
ccctacccccgtccaggcacctgccccggggggaccttcaccccctccatgaagtcgacc
aaggactaccccgacgaagtgatcaacttcatgcgcgcgcacccgctgatgtaccacgcc
gtgtaccccacgcaccgccagccgctggtggtgcgcaccaacgtcaactaccgcttcacc
accgtggccgtggaccaggtggacgcggcggacgggcgctatgaggtgcttttcctgggc
acagatcggggcaccgtgcagaaggtcattgtgctcccccgggatgacatggagacagag
gagctcatgctggaggagattgaagtgttcaaggtgccagcacccatcaagacgatgacc
atctcctccaagaggcaacagctgtacgtgtcctcggccgtgggcgtgacgcacctggcg
ctgcaccgctgcgacgtgtacggggaagcctgtgccgactgctgcctggcccgggacccc
tactgtgcctgggacggcagcgcctgcacccgctactccgcctcctccaagaggcgcagc
cggcggcaggacgtccggcacggcaaccccatccggcagtgccgcggctacaactccaac
gctaacaagaacacggtggaggccgtgcagtacggggtggagggcagcacagccttcctg
gagtgccagccccgctcgccccaggccagcgtcaagtggctgctgcagaaggacaacagc
gaccggcggaaagagctgcgggtggagggccgggtgctgcgcacggagcagggcctgctg
ctgcgcgccctgcagctcggcgacagcggcctctactcctgcaccgccaccgagaacaac
ttcaagcacacggtgaccaaggtgcagctccgtgtcctcagcagccgcgccgtccacacc
gtgctggtccaggcggagcccccccccggcctgccgggtgcccccactccccgctaccag
gacctgctgcagctcctcactcagcctgaaatgggactcctggaccagtactgccagggc
tactggcggcacacggccgccagccccccgcagccgctggccggcctcaaagccaaggag
cagcaggagcagaagaagcctcgaaaccggcggaatcaccagccagagacctatgggcat
acatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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