KEGG   Taeniopygia guttata (zebra finch): 100227956
Entry
100227956         CDS       T01082                                 
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100227956 (POLA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgu03032]
    100227956 (POLA1)
Enzymes [BR:tgu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100227956 (POLA1)
DNA replication proteins [BR:tgu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    100227956 (POLA1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-DNA_Pol DNA_pol_alpha_N DUF1744 DNA_pol_B_2 MTR4_beta-barrel
Other DBs
NCBI-GeneID: 100227956
NCBI-ProteinID: XP_030138234
Position
1:101224627..101406031
AA seq 1496 aa
MAESGARGRDAMSESGSFAASRSRRERKNRRGQQEALERLKKAKAGEKLKYEVEEFTGVY
DEIDEDEYSKMVRDRQDDDWIVDDDGIGYVEDGREIFDEDLDDDALISNKKGRGGKTSTI
DKKNVKKSVVSKPNTIKSMFMASAGKKNTDKTVDLSKDDLLGDILQDISAETVQLSPPPV
IMLKRKRSAGVPLNPFSVQSQTSKVITPVSKKAPAHVGKETLPPASFHPKHPNYTAKSVR
VSENEDTKHVQKPIENERLVKAVGEKATKVLPAALPDDDQGMMHFDEEDFDEPMEAEHVE
TIPETAESLKRDSEIEKKETEQLESEKKETSVLSSLPGLSCWDRIDEDEADLATAEVQLD
PNLLPLVNGESGDQVLRFYWLDAYEDQFSQPGVIFLFGKVWIESATTYVSCCVTVKNIER
TVYLLPRETEIDLSTGKETETPVTIMSVFKEFNDTISPKYKIMKFKSKKVEKYYAFEIPD
VPAKSEYLEVKYSAECPRLPQDLKGQTFSHVFGTNTSSLELLLMNQKIKGPCWLEIKNPQ
PSNPPVSWCKVEAVAMKPGLVNVVKDLSPPPPLVVMSFSMKTTQNPKTHQNEVVALAALV
HQKFPLDKAPPQPPFQTHFCAVSKPSDCIFPYDFKEAVKKKNAKIEIAATERTLLGFFLA
KIHKIDPDVVVGHNIYGFDLEVLLQRINLCKVPHWSKIGRLRRSNMPKLGGRGGFAERNA
ACGRMICDVEISAKELIRCKSYHLSELVHQILKTEKITILPEEIPNMYSDSPRLLFMLEN
TWIDAKFILQIMCELNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIVP
DKQVFKRPPQKLVDEDEDFEDQNKSKIGKKKAAYAGGLVLEPKVGFYDKFILLLDFNSLY
PSIIQEFNICFTTVQRLSSEAQKRAETEEEEEIPELPDPSLEMGILPKEIRKLVERRRQV
KQLMKQPDLNPDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILM
HTKEMVQKMNLEVIYGDTDSIMINTNSTSLDEVFKLGNKIKSEVNKLYKLLEIDIDGIFK
SLLLLKKKKYAALSVEPTGDGKYVTKQELKGLDIVRRDWCDLAKQTGNYVIGQILSDQPR
DIIVENIQRRLMEIGENVVSGQIPANQFEINRALTKDPQDYPDKKALPHVHVAMWINSHG
GRKVKAGDTVSYIICQDGSDLSASQRAYAPEQLKKQENLKIDYQYYLSQQIHPVVARICV
PIEGIDSVLIATWLGLDPSQFRVHHHYHKDENDALVGGPAQLTDEEKYRDCERFKFCCLK
CGTENIYDNVFDGSGRFIEPSLLRCSKTECDEPPFSYVVQMNNKLLLDIRRYLRKYYSGW
LICEEPTCQNRTRRLPLSFSRSGPVCQACRKAVLKPEYSDKALYTQLCFYRYIFDVDYAM
DKVVTEEEKEYLKKKQLRREVSEAYKRLKSTVDKCLSMSGYSEVNLGKLFTVSIGR
NT seq 4491 nt   +upstreamnt  +downstreamnt
atggcggagagcggcgcgcggggccgggacgctatgagtgagtctggaagttttgcagca
tcacgttctagacgtgagaggaaaaatagaagaggtcagcaagaagcacttgaacgtctg
aaaaaagccaaagctggggaaaaattaaaatatgaggttgaggagttcacgggtgtttat
gatgaaatagatgaggatgaatactccaagatggtcagagaccgtcaggatgatgactgg
attgttgatgatgatgggataggttatgtagaagatggaagggaaatctttgatgaagat
ctggatgatgatgctcttatttccaataagaaaggaagaggtggcaaaacatctacaatt
gataaaaagaacgtgaagaaatctgtagtgtcaaagccaaacacaattaagtctatgttt
atggccagtgctgggaagaaaaacacagataaaactgtggacctgtccaaggatgattta
cttggggatattcttcaagatattagtgctgaaacagttcagctaagtccaccaccagtt
ataatgttgaaaaggaaaagatctgcgggagtaccactcaatcctttctctgtgcagtcc
caaacttctaaggtaatcacccctgtatcaaagaaagctcctgctcatgtcggaaaggaa
actcttcctccagcttcatttcatcctaaacaccccaattatacagcaaaatctgtcaga
gtctctgaaaatgaggacaccaagcatgtgcaaaaacctatagaaaatgagagattagtg
aaggcagtaggagagaaagctactaaagttctacctgcagcacttccagatgatgatcag
ggaatgatgcattttgatgaggaggactttgatgaacctatggaagcagaacatgtggaa
actatacctgagacagctgaaagtttgaaaagagacagtgaaattgagaagaaagagaca
gagcagctagaatcagagaagaaagagacatctgtcttaagttctctcccaggtctctca
tgttgggatagaattgatgaggatgaagctgatctagcaacagcagaagttcaactggac
cccaatctccttccccttgtgaatggggaaagtggtgatcaagtcttaagattttattgg
ctggatgcttatgaagatcagttcagtcagccaggtgtgatatttttgtttggcaaagtt
tggattgaatctgcaaccacctatgtcagctgttgtgtgacagtgaaaaatattgagaga
actgtttatctgctgcctcgtgaaacagaaattgacctatctactggtaaagagacagag
actccagtaactataatgagtgttttcaaggaatttaatgacaccatttcaccaaagtac
aagatcatgaagttcaaatccaagaaagtggaaaaatactacgcttttgagattccagat
gtaccagcaaaatctgaatacctagaagttaaatattcagctgaatgccctcggcttccc
caagatctgaagggacaaacattctcacatgtctttggaaccaacacctctagcctggaa
cttctcttgatgaatcagaagatcaaaggaccctgctggctggaaataaaaaatccacag
ccttcaaatccgccagtcagctggtgtaaagtggaggctgtggccatgaagcctggcttg
gtgaatgtggttaaagatctttctcctcctcctcctctggtggtcatgtccttcagcatg
aagaccactcagaacccaaagactcaccagaatgaggttgtggctcttgcagctctggtt
catcagaaatttcccttggataaggctccacctcagcctccttttcaaacacacttctgt
gctgtttccaaaccgagtgattgcatttttccttatgacttcaaagaagccgttaaaaag
aagaatgctaaaatagagattgctgcaacggagagaacactgctgggatttttccttgca
aagattcacaaaattgacccagatgttgttgtgggtcataatatttatggatttgatctg
gaagtgctgcttcaaagaattaatttgtgcaaagtccctcactggtccaagataggtcga
ctgaggaggtctaatatgccaaagcttgggggccgaggaggatttgcagaaaggaatgct
gcttgtggtcgaatgatctgtgatgtagaaatttctgctaaagaactaattcgttgcaaa
agttaccatttgtctgaactggtgcatcagattttgaaaacagagaagataacaattctg
ccggaggaaattccaaatatgtacagcgattctcctcgcttactgttcatgctggaaaac
acctggatagatgccaagttcattctccagatcatgtgtgagctgaatgttctgccactg
gctcttcagataacaaacatctccgggaatgtcatgtcaaggacaatgatgggtggacga
tctgaacgtaacgagttcctgctgcttcatgcctttcatgagaaagattacattgtgcca
gacaaacaagttttcaaaaggcctccacagaagctggtggatgaagatgaagattttgaa
gatcagaataaatcaaagatagggaaaaagaaagcagcttatgctgggggcttagtcttg
gaacccaaagtcggtttttatgacaagtttattttgcttctcgacttcaacagcttgtac
ccatcgattattcaggagttcaacatctgctttaccacagtgcagcgactgtcatcagaa
gcacagaaaagggcagagactgaagaagaggaagaaattccagagcttccagacccatct
ctggaaatgggaattttgcctaaggaaatcaggaaactggtggagagaagacgccaagtt
aagcagttaatgaaacagccagatttaaatcctgacctctatttacagtatgatatcaga
cagaaagctttgaaactcactgctaacagcatgtatggctgcctgggattttcctacagc
aggttctatgccaagcctttggctgctttggtgacacataaagggagagagattttgatg
cataccaaggagatggtgcagaagatgaaccttgaagtgatttatggagacacagattcc
attatgataaacactaatagcaccagtttggatgaggtcttcaagctggggaataagatc
aaaagtgaagtgaacaagctgtacaaattgttggaaatcgatattgatggaatttttaag
tccttactattgttaaagaagaagaaatacgctgctctgagtgtggaaccaacaggagat
gggaaatacgtaactaaacaagagctaaaagggctggacatagtccggagagattggtgt
gatcttgctaaacagactggaaactatgtaattggtcagattctttctgatcagccccga
gacataattgtggaaaatattcaaaggcgacttatggaaattggagaaaatgtggtcagt
ggtcagatcccagcaaatcagtttgaaataaacagggcattgacaaaagatccccaggat
tatcctgacaaaaaagctttgccacatgtgcatgttgccatgtggataaactcccatgga
ggccgaaaggtgaaggcaggagacacagtgtcatatatcatttgtcaggacggatcagat
ctcagtgccagccagcgagcatatgctccagaacagttaaaaaagcaagaaaatcttaaa
attgattaccagtactacctgtcacagcaaatacatccagtagttgctagaatatgtgtg
cccatagagggaattgattctgttcttattgcaacatggttaggactggatccctcccaa
ttcagagtgcatcaccattaccataaagatgagaatgatgccttggttggtggcccagct
cagctcactgatgaggagaaatatagggattgtgaaagattcaagttttgctgcctcaaa
tgcggaacagaaaatatttatgacaatgtctttgatggttcggggcgatttattgaaccc
agcttgctaagatgcagcaagacagaatgtgatgagcctcctttcagctatgtggttcaa
atgaacaacaagttactgctggatattagacgctacctcagaaaatactacagtggttgg
ttaatatgcgaggagccaacttgccagaatcgaacccgtcggcttccgctgagtttctcc
cggagtggccccgtgtgccaggcctgcaggaaggctgttctgaaaccagagtattctgat
aaggccctctacactcagctctgcttctaccgatacatttttgatgtggactatgcaatg
gataaagtggttactgaggaagaaaaagagtatttgaagaagaagcaactcaggcgggaa
gtctctgaggcctacaaaagactgaagagcaccgtagacaaatgcctgtccatgagtggc
tactcagaagtgaaccttggcaaactcttcaccgtcagtattggaagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (96)   

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