KEGG   Taeniopygia guttata (zebra finch): 100229418
Entry
100229418         CDS       T01082                                 
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tgu03000]
    100229418 (SOX21)
Transcription factors [BR:tgu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100229418 (SOX21)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp TGF_beta_GS
Other DBs
NCBI-GeneID: 100229418
NCBI-ProteinID: XP_002196901
Ensembl: ENSTGUG00000011206
Position
1:complement(73558062..73561754)
AA seq 281 aa
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq 846 nt   +upstreamnt  +downstreamnt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacgaaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgctgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cggaagcccaagacgctgctcaagaaggacaagtttgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcatgccggc
gcggccggcgggctggtgcccgagtcgctcctggccaaccccgagaaggcggcagccgcc
gccgccgctgccgccgctcgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gccgccgcggccgccgccagcagcccctattccctgctggacctgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccggattgccctatgcctcctcgctgggc
tatcccggcgccggcggggcgggcgccttccatggggccgccgctgctgccgccgccgcc
gcggccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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