KEGG   Taeniopygia guttata (zebra finch): 100229422
Entry
100229422         CDS       T01082                                 
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04110  Cell cycle
tgu04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100229422 (SMC3)
   04114 Oocyte meiosis
    100229422 (SMC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tgu03036]
    100229422 (SMC3)
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tgu00535]
    100229422 (SMC3)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    100229422 (SMC3)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    100229422 (SMC3)
Proteoglycans [BR:tgu00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   100229422 (SMC3)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_15 AAA_23 AAA_29 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 100229422
NCBI-ProteinID: XP_002197776
Ensembl: ENSTGUG00000010610
UniProt: H0ZK71
Position
6:25131829..25157387
AA seq 1217 aa
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctctaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
ttcttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttgcacgaaggcacaggtcctcgtgttatttcggcatttgtggagatt
atatttgacaattccgacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatatagtcaaa
caaggaaagatcaatcagatggccacagctcctgactctcaaagactgaagttactaaga
gaagtagctggtaccagagtgtatgatgaacgtaaagaggagagtatttcactaatgaaa
gaaacagagggcaagcgagagaaaatcaatgagttgttgaaatacattgaggagcgactg
catactctagaagaggagaaagaagagctggcacagtaccagaaatgggataaaatgagg
agagcattagaatacaccatttataatcaggaacttaatgaaacccgagctaagcttgat
gagctttctgctaaacgagagacaagtggagaaaaatcgaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttctgcaatgaaagaagagaaagagcaactcagtgctgaaagacaggagcagattaaa
cagaggactaaattagagctgaaggctaaagatctgcaggatgaattagctggcaacagt
gagcaaaggaaaagactgctaaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaattggctgaaacagagccaaaatttaacagcgtgaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacacaagaaagaacagatctttatgcaaagcaaggt
cgagggagccagtttacttccaaagaggaaagggataagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggactta
gaggatacagaggcaaacaaggagaaaaacttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgagctacagagtgaaagaaattatttatggagagaagagaatgcagaacaa
caagctcttgctgcaaagagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattctgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaaccagcatgttctgaatggctatcatggaattgtgatgaataacttc
gaatgtgaaccagcattctacacctgtgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctgcctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgatcagtaaactgagatacaatccaagatttgat
aaagctttcaaacatgtttttgggaagactttaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcacaatggattgtatcactctggaaggtgatcaagtcagccac
cgaggtgctttgactggaggttattatgacaccaggaagtctcggcttgaattgcaaaaa
gatgttagaaaagcagaagaggaacttggtgaactcgaagcaaagctcaatgaaaactta
cgtaggaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgaaacacagcagagaaagttcaaagcctcacgagacagtattttgtcagagatgaaa
atgctgaaggagaagaggcagcagtctgaaaagacatttatgcctaagcaacgtagcttg
cagagcctggaggcaagtttacatgccatggagtcaactagagaatcgttaaaagcagaa
ctggggacagatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgcgctt
aatgatgaaattcgacaactgcagcaagaaaacagacagcttttgaatgagaggattaaa
ttagaaggtattatcacaagagttgaaacatacctcaatgagaatctgagaaaacgcttg
gaccaagtggaacaagagctgaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaggatacactggcacggtca
gatgatctggataactctattgacaaaacagaagcaggaattaaagaacttcagaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgctattaaccatgatacaaaa
gaacttgaaaaaatgaccaacaggcaaggcatgctcctcaagaagaaagaggagtgcatg
aagaaaatacgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaagctggagcagtgcaatactgaactgaagaaatacagt
catgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaaggcaagaggaactggacaggggctacaaatccatcatggaactgatgaatgtc
cttgagctcaggaaatatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccaaaagttagtacctggtggtaaggccacactggtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgaaggtgaaggcagtactgagagcgaaagggga
tctggatctcagagcagtgttccatctgtagatcagttcactggagttggcataagggta
tcgttcacagggaagcagggggaaatgagagaaatgcagcaactttcaggtggacagaaa
tctttagtggccctggccctaatatttgccatccagaaatgtgatccagctccattttac
ttgtttgatgaaattgaccaagccttggatgcccagcatagaaaagctgtgtcagatatg
attatggaactggctgaacatgctcagtttattacaacaacttttaggccagaactgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaagtcagtcatattgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacacatggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (58)   

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