KEGG   Thermococcus sp. AM4: TAM4_112
Entry
TAM4_112          CDS       T01638                                 
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
tha  Thermococcus sp. AM4
Brite
KEGG Orthology (KO) [BR:tha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tha03016]
    TAM4_112
Enzymes [BR:tha01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     TAM4_112
Transfer RNA biogenesis [BR:tha03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TAM4_112
 Prokaryotic type
    TAM4_112
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: EEB73824
UniProt: B7R398
Position
1133554..1134801
AA seq 415 aa
MDYREFFSRFRHLSEKPGIGGRIKILPEDFVVIEEPLPQIFEGRKHAIFLLKKRNWDTMA
VIKEIAKRAGISHRDIGFAGTKDRHAVTYQYISVPAEAKEKVESVQIRDIELRFVSYGRF
IKLGHLLGNRFRIIVRDVEEDAFERAKEIIHELREKGGFPNYFGYQRFGERRVVNHLIGK
LLLRGEFEEAARLFLGYADGSMEGDEARKNFWETGDVDRALEEFPRFLRYERTLLYTYKK
TGSWRKAFLSLPLPIMRIFIHAYQSYLFNLYLPRRSEELPLNEPLVGDVVVQVKGGIPYR
DRTYRVTETNINFVREKVRRGEAMVSGPLFGFAMRGAKGIPGELEREILEEEGITLETFK
KLPKPMAEPGGRRELLIRPLGMTYGYVPGTGMCFRFFLPKGVYATSVLREIMKDH
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggactaccgcgagttcttctcccggttccggcacctgagcgagaagcccgggataggg
ggtagaatcaagatccttcccgaggatttcgttgtcatcgaagaacccctcccccaaatc
ttcgaggggaggaagcacgcgattttcctcctcaaaaagcgcaactgggacactatggcc
gtgataaaggagatagccaagcgcgccgggataagccaccgcgatataggcttcgctgga
accaaagacagacacgcggtaacttaccagtacataagcgtgcccgcagaagctaaggaa
aaagttgagtcagttcagatccgagacatcgagctgaggttcgtctcctacggcaggttc
ataaagctcggccacctgctcggcaacaggtttaggataatcgtccgtgacgtcgaagag
gacgcctttgaaagggctaaggagataatccatgagctccgcgagaaaggtggcttcccc
aactacttcggctaccagcgcttcggcgagaggagggtggtaaaccacctgattggaaag
ctcctcctccggggagagtttgaagaagctgcaaggctcttcctcggctacgccgacggg
agcatggagggtgatgaagccagaaagaacttctgggagacgggcgacgttgatagggct
ttggaggagttcccgcgcttcctccgctacgagaggaccctgctttacacctacaagaag
accggaagctggagaaaggccttcttatctctcccgctcccgataatgcgcatctttatc
cacgcttatcagagctacctcttcaacctatacctgccgaggaggagcgaggagctacct
ctcaacgaaccgctcgtcggcgatgtggttgtccaagtgaagggcggaatcccttaccgc
gacagaacctaccgagtcaccgagactaacatcaacttcgtccgcgagaaggtgagaagg
ggcgaggccatggtttcgggtccgctcttcggcttcgcgatgagaggggctaagggaatt
ccgggtgaactcgagagggaaatccttgaggaggaagggataacccttgaaacattcaaa
aagctcccaaagccgatggccgaacccggaggtaggagggaactcctgatccgtcccctc
ggcatgacctacggctacgttcccggaactggaatgtgcttcagattcttccttccgaag
ggggtttacgcgaccagcgtcctgcgcgagatcatgaaagaccactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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