KEGG   Thalassospira marina: CSC3H3_09740
Entry
CSC3H3_09740      CDS       T05224                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
thac  Thalassospira marina
Pathway
thac00740  Riboflavin metabolism
thac01100  Metabolic pathways
thac01110  Biosynthesis of secondary metabolites
thac01240  Biosynthesis of cofactors
thac02024  Quorum sensing
Module
thac_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:thac00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CSC3H3_09740 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CSC3H3_09740 (ribD)
Enzymes [BR:thac01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CSC3H3_09740 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CSC3H3_09740 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AUG52961
Position
complement(2131249..2132370)
AA seq 373 aa
MAGASFSDDDRHFMRVALSLSQRGLGNVWPNPAVGCVIVSASGEIVGRGWTKPGGRPHAE
RVALDQAGENARGATAYVTLEPCSHFGKSPPCALGLIEAGVSRVISALEDPDPRVSGRGH
QMLRDAGIVVETGLLAAEAHAHNAGFLLRVTEDRPLITLKLAGSLDGRSSLANGASQWIT
GSRAREKGHYYRANHDGILVGANTVIADNPDLRCRIAGRENHSPVRVILDRTVQVSPDCK
LAQSAQETPTWLVVASGEESRAEKIFAKTAVKVLSARCADGHFDLHDVMHVLAKQGLTRI
LVESGGKLAAALLQHKLIDRIIHFQAPGIIGADGHGIIAQLGLQNLDLMQRFKRRSSENV
GQDYLISYDKITD
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggccggggcaagctttagcgacgatgaccggcatttcatgcgggttgccctgagcctt
tcgcaacgcggtctgggcaatgtctggcccaatccggctgttggctgtgttattgtatct
gccagtggtgaaatcgttggccgtggctggaccaaaccgggcggtcgcccccatgctgaa
cgtgtcgcacttgatcaggcgggtgaaaatgcgcgtggtgcaacggcctatgtcaccctg
gaaccctgcagccattttggcaaatccccaccttgcgcacttggcctgatcgaggctggt
gtttcgcgcgttatcagcgcgcttgaagatccggacccccgtgtttctggccgtggacat
caaatgctgcgcgatgcaggcattgttgtcgaaactggccttcttgccgccgaggcccat
gcccataatgccggctttttgctgcgcgtgacagaagaccggccgttgattacccttaaa
cttgctggcagccttgatggcaggtcaagtctggccaatggtgccagccaatggattacg
ggcagcagggcgcgcgaaaaagggcattattaccgcgccaatcacgatggcatcctcgtt
ggggccaataccgtcattgccgataatcccgatcttcgctgccgcattgccgggcgtgaa
aaccattcgcccgtgcgggtgattttggatcgaactgttcaggtatcgccagattgcaaa
ttggcgcaatcagcgcaggaaacgccgacctggctggtggtggcttcgggcgaagaatcg
cgtgccgagaagatttttgcaaaaacagcagtaaaagtgctgtcagcccgatgcgcagac
gggcattttgacctacatgacgtaatgcatgtgcttgcgaaacaggggcttacacgcatt
cttgtcgaaagtggcggcaagcttgctgcggcccttttgcagcataaactgatagaccgg
attatacattttcaggcacctggcattattggcgctgatggacacgggattattgcgcaa
ctgggattgcaaaacctggacctgatgcagcgcttcaagcgccgatcttctgaaaatgta
ggtcaggattatttgataagttacgataaaataacggattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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