KEGG   Thalassospira marina: CSC3H3_19255
Entry
CSC3H3_19255      CDS       T05224                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
thac  Thalassospira marina
Brite
KEGG Orthology (KO) [BR:thac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:thac03016]
    CSC3H3_19255
Enzymes [BR:thac01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CSC3H3_19255
Transfer RNA biogenesis [BR:thac03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CSC3H3_19255
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 Peripla_BP_2
Other DBs
NCBI-ProteinID: AUG54615
Position
complement(4253987..4254598)
AA seq 203 aa
MTNYLHHGDLPDGLDLGKIVAIDSETMGLNPHRDRLCVVQLSAGDGDAHLVKFDGSDYSA
PNLKKMLADPEVLKLFHFGRFDIAVMDAYLGVRCAPVYCTKIASKLVRTYTDRHGLKDLV
RELVGVEISKQQQSSDWGAADLSPEQIAYAASDVLYLHKMKEELDRRLVREGRMETAQAC
FDFLPTRASLDLAGWPESDIFAH
NT seq 612 nt   +upstreamnt  +downstreamnt
atgacaaactacctccatcatggagatttgcccgacgggcttgatctaggcaaaattgtt
gcaattgacagcgaaacgatgggcctgaacccgcatcgtgatcgcctgtgtgtcgtgcag
ctttctgccggggatggcgatgcccatctggtgaaatttgatggttcggattacagcgcg
cccaacctcaaaaaaatgctggcagaccccgaagtcttgaagctgtttcatttcggccgg
tttgatattgcggtgatggatgcctatcttggtgtgcgttgcgcaccggtatattgcacc
aaaatcgcatcaaagctggtgcggacttataccgatcgccacggtctgaaggacttggtg
cgcgaactggttggtgttgaaatttccaaacagcagcaaagctcggattggggggctgca
gacctgtcgcctgaacagattgcctatgctgccagcgatgttctttatctgcacaagatg
aaagaagagcttgatcgccgtctggtgcgtgaaggccgcatggaaacggcccaggcctgt
tttgatttcctgccgacccgcgccagcctggaccttgcgggatggccagaatcagacatc
tttgcccattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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