KEGG   Tarenaya hassleriana (spider flower): 104812243
Entry
104812243         CDS       T04125                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104812243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thj03021]
    104812243
Enzymes [BR:thj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104812243
Transcription machinery [BR:thj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104812243
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 104812243
NCBI-ProteinID: XP_010537597
Position
Unknown
AA seq 1173 aa
MGSSGMDIDVDDMMDDCEPFSVSEFGETFLQDFCRKAATSFFNEYGLISHQINSYNHFIQ
HGLQKLFDSLGEMIVEPSFDPTKNKDHDWRYASVRFGEVSVEKPTFFANGKEFKFLPRHA
RLQNMTYSSRMKVNVEVEVFTRKVVRQDKFKTGKDEFVEKKVLDVKKQDIPIGRIPVMVK
SDLCHMKDDEKGDCAFDHGGYFVIKGAEKVFIAQEQICLKRLWVSRTPEWTVAYRSEMKR
NRLIVRLGEPPKSENSNRTEKVLTVYFLSTDIPVWILFFALGVSSDKEIIDLIDCGCHYA
SLVNIFLASIRDADGVGEGFRHGINAITYVGNQIKNTKFPPGESPDECISLYMFPGLKGV
KQKARFLGYMVKCLLLAYCGKRKCENRDSFRNKRVDLAGELLETELRVHLLHARKTMTKA
MQRHLTGDGDLKQIEQYLDASIITNGLTRAFSTGAWSHPFKKMERISGVVATLGRANPLQ
SLIDLRRTRQQVQYNGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLSLLGLVSTEIL
EPPVLKVLFECGMEELVNDTSSSLHGQYKVFLNGDLVGVSANSESFVYELRSRRRQKELP
HQMEIKRDANDEEVRIFTDAGRILRPLLVIENIHKLKQDKPIQYSFQRLLDQGILELIGI
EEEEDCRTAWGIKHLLKEDKVGMSKGYTHCELDMSFLLGVSCGIVPFANHDHARRVLYQS
QKHCQQAIGFSTTNPGIRCDTLSNQLFYPQKPLFRTLASDCLGKEVLYNGQNAIVAVNVH
LGFNQEDSIVMNKASLERGMFRTEHIRSYKAEVDTKDEKKRKKLDDHVYFGKTASKIGRV
DSLDDDGFPFIGANMQSGDIVIGRCAESGADHSIKLKHTERGMVQKVILSSNDDGKNFAT
VSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQ
LLEAALSKGIACGVKTKGKTVGSTAKLTRHATPFSTPTVDDITDQLHRAGFSRWGSERVY
SGRTGEMVRSLIFIGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM
ERDCLLAHGASANLHERLFTLSDSSEMYICRRCESLANVIQRAVGNHKIRGPYCQLCGSA
DNIVRVNVPYGAKLLSQELFSMGITLKFETRLC
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgggttcatcaggtatggatattgatgtggatgatatgatggacgattgtgagccgttt
agtgtgtctgagtttggggaaacttttctccaagacttctgcaggaaagctgcaacgtcg
ttcttcaatgagtatgggctcataagccaccagatcaattcttacaaccatttcatacaa
cacgggctccagaagctgttcgattcactaggtgaaatgatcgttgagccctcgtttgat
ccaacaaagaacaaagaccatgattggcggtatgcctcggtgaggtttggggaagtcagt
gttgaaaagcctacattcttcgcaaatggcaaggaatttaagtttcttccaaggcatgct
aggcttcagaacatgacgtactcatcaaggatgaaagtaaacgtcgaagttgaggtgttt
acgaggaaagttgtcaggcaagacaaatttaagacaggaaaagatgagttcgttgagaag
aaagttttagacgttaaaaaacaggacattccgattggtcggattccagtgatggtgaag
tcagatctttgccacatgaaggatgacgagaagggtgactgtgcctttgatcatgggggt
tattttgtgataaagggcgctgagaaggtgtttattgctcaagagcagatatgtttaaag
agactctgggtttcccgtactccagaatggacagttgcctaccgttcagaaatgaaaaga
aatagactcatcgtgcgtctaggtgagcccccgaaatcggaaaattctaacagaacagag
aaagttcttactgtttatttcttgtcaacggatatccctgtctggatcctgttctttgcc
ctgggtgtctcgtcagacaaagaaatcattgatctgattgattgtggctgtcactatgca
agcttagtcaacattttcttggcctctattcgtgatgccgatggagtcggtgaaggattc
aggcatgggataaatgctataacatatgtaggaaatcaaataaaaaacacaaaatttcct
cccggtgaaagcccggatgagtgcataagcctctatatgtttccgggtctcaaaggtgtg
aagcaaaaagcacgtttcctgggctacatggtgaagtgccttctacttgcctactgtggg
aaacgaaaatgtgaaaatagagacagttttaggaacaaaagggttgatttggcaggagaa
ttgttagagacagagctacgggtgcatttgttacatgcaagaaagaccatgaccaaggct
atgcagaggcacctgactggagatggtgatctgaagcaaattgagcaatatttggatgct
tccattatcactaatggactaacaagagctttctcaactggagcttggtctcatcctttc
aagaagatggaaaggatttcaggcgttgtggcaactctaggtcgagcaaatccattgcag
tcattgattgatcttaggagaacacgacaacaggttcaatacaatgggaaggttggagat
gcaagatatccgcacccttctcactggggccgggtttgctttctgtcgacccctgatgga
gagaattgtggtctggtgaagaatttatccctcctgggacttgttagcactgaaatcttg
gagcctcctgtgcttaaagtgctttttgaatgtggaatggaggagctggtgaatgacacg
agctcatcgctgcatggccaatataaagtgtttttgaatggagatttggtaggagtcagt
gcaaattctgaatcttttgtctatgagttgagaagtaggcggcgtcagaaggaattacct
catcagatggaaatcaagagagatgcaaacgacgaagaagtaagaattttcaccgatgct
gggagaattcttcgacctcttctggttatagagaacattcacaagttgaagcaggacaaa
ccgatacagtactccttccagcgtcttttagaccaagggattcttgagctgattggaatt
gaagaagaagaagattgccgcacggcatgggggatcaagcaccttctgaaggaagataaa
gttggaatgtccaaaggttatacacactgtgaattagacatgtctttcttgctaggtgtt
agctgtggaattgttccgtttgccaatcatgaccacgcaaggagagttctgtaccagtcc
cagaaacactgtcaacaggccattggtttctccacgacaaaccctggtatcagatgtgat
acactgtctaatcagctcttctatcctcagaagccccttttcaggacactggcctcagat
tgtcttggaaaagaggtcttatacaatggtcagaatgccatagttgcagtgaatgtgcat
cttgggttcaatcaagaggactcaattgtaatgaacaaggcgtcgttggaacgtgggatg
ttccggactgagcatattaggagctataaagccgaggtggataccaaggatgagaagaaa
agaaagaagctggatgaccatgtatactttgggaagactgccagcaagattggtcgtgtc
gacagccttgatgatgatggattccccttcatcggggcaaatatgcagagtggtgacatt
gtcatcggcagatgtgccgagtcaggggctgatcacagcataaaactcaagcacactgag
agaggaatggttcaaaaagtcatcttgtcgtctaatgatgatgggaaaaactttgctaca
gtttctctgaggcaggttcgttccccgtgtcttggagacaaattctccagtatgcatggt
cagaagggtgttttaggttatctggagtcacaagagaactttcctttcacgatacaagga
atagttccagatattgtgataaacccacatgcatttccttcaaggcaaaccccaggtcaa
ctgttagaggctgctttgtccaagggaattgcatgtggtgtcaaaacaaagggcaagact
gttgggagtacagcaaaattgacgaggcacgctactcctttctccactccgactgttgac
gatatcaccgatcagcttcacagggccgggttttcgagatgggggagtgaaagagtatac
agcggtaggacaggagaaatggtacgctctcttatattcatcggtcccacgttctaccag
cggctggttcacatggctgaggacaaagtcaagttcaggaacacgggtccggtccacccg
ctaacccgccaaccagttgcagataggaaacggtttggaggcattaagtttggagagatg
gaacgtgactgcttattagcccacggcgcctcagccaacctgcacgaacgtctcttcact
ctcagtgactcgtcagagatgtatatctgcaggagatgtgaaagcttggccaatgttatc
cagagagctgtcgggaaccacaagatccgagggccgtactgtcagctctgtggttcagcc
gacaacattgttcgggtcaatgttccttatggagccaagctactgagtcaggagttgttc
agtatgggcataactctcaagtttgagactaggctctgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system