KEGG   Tarenaya hassleriana (spider flower): 104818770
Entry
104818770         CDS       T04125                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
Organism
thj  Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:thj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:thj03009]
    104818770
   03036 Chromosome and associated proteins [BR:thj03036]
    104818770
Enzymes [BR:thj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104818770
Ribosome biogenesis [BR:thj03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    104818770
Chromosome and associated proteins [BR:thj03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    104818770
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII zf-CCHC CMS1 YgbB ERCC3_RAD25_C zf-CCHC_4 zf-CCHC_2 AAA_19
Other DBs
NCBI-GeneID: 104818770
NCBI-ProteinID: XP_010546798
Position
Unknown
AA seq 739 aa
MASSIGVPSLYQVPYLEISKPKSKKTPSCLVFSLDRPFFRSLPLRRPCVSLSSSSVIPSA
VATPNSVLSEEAFKGLGLSDDENALDEENGAVPSSDELAISKLGLPERLADSLEKRGITH
LFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKRLTEDAVDHSSFRRSGRLPKLL
VLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNTQQSALSRGVDVVVGTPGRIIDLIE
GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPSKRQSMLFSATMPSWVKKLARKY
LDNPLNIDLVGDREEKLAEGIKLYAIPATSTSKRTILSDLITVYAKGGKTIVFTQTKKDA
DEVSLALTSSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIH
YELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRRTVRSLERDVGCNFEFISPPTVGEV
LEASAEQVVATLNGVHPESIEFFSATAERLFEEKGTGALAAALAQLSGFAQPPSSRSLIS
HEQGWVTLQLMRDPSNSRGYLSVRSVTGFLSDVYTPAADEVGKIFLIADDRVQGAVFDLP
EDIAKELLDQELPPGNSISKITKLPPLQDDGPASDFYGRFSSRDRMPRGGSRGGGSRGSR
SGRGSRGWGGGRDSDDERGGRNNWSRGSRESKDDWLISGGGRRSSRSSSSSRDRSFGGSC
FICGRSGHRATDCPGKRDY
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggcgtcttccattggagttccttctctttaccaggttccttacctcgaaatctccaag
cccaagtcgaagaagacaccttcctgtttagttttctctctggacaggcccttcttccgt
tcccttcctctcaggaggccatgcgttagcctctcatcttcttctgtaattccttcggcc
gtagccactcccaattccgtgctcagcgaggaggctttcaaaggtcttggtctctctgac
gacgagaatgccctcgacgaagagaacggggccgttcctagctcagatgagctcgccatt
tctaagcttggtttgcctgagcgtcttgctgattctcttgagaagcggggtatcactcac
ctcttccctattcagagggctgttctgattcctgctttagaaggccgagacatcatagct
cgtgccaagactggaactggtaagaccttagctttcggtattccaatcatcaaacgcctc
actgaagatgctgtcgaccactcttctttcaggagatctggtcgcctgccgaaacttctt
gtccttgcacctactcgtgaactggcaaagcaagtagagaaggagattaaagagtctgcc
ccctatttgagcacagtgtgtgtttatggtggtgtttcctataatacccagcagagtgct
ctttctcgtggtgtcgatgttgttgttggaactcctggccgaatcattgacttgattgaa
ggcaggagtctgaaattgggagaggtcgagtatttggtacttgatgaagctgatcagatg
cttgctgtcgggtttgaggaggccgtggaaagcattcttgaaaatctgccatcgaagcga
cagagcatgcttttctcagcaactatgccttcttgggtcaagaagttggcgaggaaatac
ttggataatcccctgaatatcgatctggttggagaccgagaggaaaagcttgctgagggg
attaagctttatgccatcccagccacgtcaacctcaaagcgcaccatactaagcgatctc
ataacagtgtatgcaaagggtggcaagaccatcgtctttacacaaacaaaaaaagatgct
gatgaggtctcacttgcgttgacaagcagcatagcgtctgaagcattgcatggagatata
tcccaacatcagagggaaagaacactcaatggtttccggcaagggaaattcacagttcta
gttgccactgatgttgcagctcgtgggctcgacatcccaaatgttgatctcattatccat
tatgaacttccaaatgacccagagacttttgtgcatcgttctggccgtactggacgtgct
gggaaagaaggcactgcagttctgatgttcacgagcagccaaaggagaacagtgagatct
ctggagcgtgatgtcggctgcaactttgaatttattagcccaccaactgttggagaagtg
ttggaagcctcggcagaacaagtggttgccactctaaatggagttcaccctgaatccatc
gagtttttctctgcaactgctgagagactatttgaagaaaaaggaacgggtgcattggct
gcagctttggcacaattaagtggttttgctcagcctccatcatctagatcgctcatcagc
cacgagcagggatgggtgacattgcaattgatgcgagatccatcaaattcgagaggctat
ctatctgtgagatctgttactggtttcctctctgatgtatatactccagctgcggatgaa
gttggaaaaatcttcttgattgcggatgacagggtgcaaggagctgtttttgatcttccg
gaggatattgcgaaagagctccttgaccaagaactgccaccaggaaactccatctccaag
attactaagttgcctcctctgcaagatgatgggccagctagtgacttctatgggcggttt
tcgagcagagaccggatgccccggggaggttccaggggaggaggttcgaggggatcccga
tctggaagagggtcacgaggttggggtgggggtagagattccgacgatgagagaggaggt
agaaacaactggtctcggggctcgagggaaagcaaggatgattggttgattagcggtggt
ggaagaagatcaagcaggtcctcttcttcttcgcgagacaggagtttcggaggttcttgc
ttcatctgtgggcgttcgggccacagggccactgactgtcccggcaagagagactactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (35)   

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