KEGG T01640: TEH

Tetragenococcus halophilus NBRC 12172: TEH_00040

Entry

TEH_00040         CDS       T01640

Symbol

recF

Name

(GenBank) DNA replication and repair protein RecF

K03629

DNA replication and repair protein RecF

Organism

thl Tetragenococcus halophilus NBRC 12172

Pathway

thl03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:thl00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TEH_00040 (recF)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thl03400]
    TEH_00040 (recF)
DNA repair and recombination proteins [BR:thl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TEH_00040 (recF)

SSDB

Motif

Pfam:

SMC_N AAA_15 AAA_23 AAA_21 AAA_27 AAA_29 FISNA

Other DBs

NCBI-GeneID:

11258919

NCBI-ProteinID:

BAK93330

Position

3036..4157

AA seq 373 aa
MRLNNLHIKNFRNYDELLVDFHKNVVIFLGENAQGKTNLLESIYTLALTRSHRTNNEQEL
IQWEKDQSFIKGNIQKKYTSVPIELFLTKKGRKTKVNHMEQKKLSSYIGQLNVILFAPED
LSLVKGSPQGRRKFLDMEIAQIDSVYLYESTQYQKILKQRNQYLKQLAEHKQTDKLYLDI
LSEQLIDHGSKVLLARQQFVKRLEFWANQLHQKITQSKEELTIEYRSSIPGDHWNDEQAV
KKAYTQEIEKTKDKERLRQITLVGPHRDDLSFLINKKDVQTFGSQGQQRTAALSVKLAEI
DLIKEETGEYPVLLLDDVMSELDDSRQLHLLETIEGKVQTFLTTTTLKQVKDKMSVEPEI
FYINQGQLEGEDV

NT seq 1122 nt +upstreamnt +downstreamnt
atgcgtctaaataatctacatattaaaaattttcgtaattatgatgaattattggtagat
tttcataaaaatgttgttatttttttaggtgaaaatgctcaaggtaaaacgaatttgctg
gagagtatttatacactagctttaactcgtagtcatcgaaccaataacgaacaagaactt
attcagtgggaaaaagatcaaagttttattaaaggcaatattcaaaaaaaatatacaagt
gttccaattgagttgtttttgactaaaaaaggtcggaaaacaaaagttaatcatatggag
caaaaaaagctttctagttatattggccagttaaatgtcatcttatttgcaccagaggat
ctttctttagtcaaaggtagcccacaaggaagaagaaaatttttagatatggaaattgct
cagattgattctgtttatctttacgagtctacgcaatatcaaaaaatattaaaacaacga
aatcaatatcttaaacaactggctgagcataaacaaactgataaactatacttggacatt
ttatcggagcaattgattgaccacgggagtaaagtgctgttggctcgtcaacagtttgtc
aaacgtttggaattttgggcaaaccaattgcatcaaaaaattactcaatcaaaggaagaa
ctaacgattgaatatcgttcgagtatccctggagatcactggaatgatgaacaagcagtt
aaaaaagcttacacccaggaaattgaaaaaacaaaagataaagaacgtttacgacaaatt
acactagtgggcccccatcgggacgatttatcttttttaattaataaaaaagatgtacaa
acgtttggttctcaaggacagcaaagaactgctgccttaagtgtaaagttagcagaaatt
gatttgataaaagaagaaacaggagagtatccggttttgttactagatgatgtgatgagt
gaactagacgattccaggcaactacatttattagaaacaattgaagggaaagttcaaact
ttcttaacaacgacaacactaaaacaagtaaaagataaaatgtctgtagagcctgaaatt
ttttatatcaaccaaggacaactagaaggagaagatgtataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system