KEGG   Tetragenococcus halophilus NBRC 12172: TEH_00600
Entry
TEH_00600         CDS       T01640                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega chain
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
thl  Tetragenococcus halophilus NBRC 12172
Pathway
thl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:thl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TEH_00600 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thl03021]
    TEH_00600 (rpoZ)
   03400 DNA repair and recombination proteins [BR:thl03400]
    TEH_00600 (rpoZ)
Enzymes [BR:thl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TEH_00600 (rpoZ)
Transcription machinery [BR:thl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TEH_00600 (rpoZ)
DNA repair and recombination proteins [BR:thl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TEH_00600 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 11261062
NCBI-ProteinID: BAK93387
Position
63938..64237
AA seq 99 aa
MMLKPSIDSLLESVNSKYSLVLLASKRAHELDAGANPTLDNFDSVKNVGKALEEIDAQTV
INDPNPELKRARIQMEAEEKQAQKEQEQKDLENRVREDS
NT seq 300 nt   +upstreamnt  +downstreamnt
atgatgttaaaaccttcaattgattctttattagaatcagttaattctaagtattccttg
gtgttattagctagcaaacgtgcccatgaattagatgctggcgcaaatccgactttagat
aattttgattcagttaaaaatgttggtaaagcattagaagaaattgatgcccaaacagtg
attaatgatcctaaccctgaattaaaacgggcaagaattcaaatggaagcagaagaaaaa
caagcgcaaaaagaacaagaacaaaaagatttagaaaatcgtgtgcgtgaagatagctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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