KEGG   Candidatus Thioglobus autotrophicus: SP60_04825
Entry
SP60_04825        CDS       T04079                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
tho  Candidatus Thioglobus autotrophicus
Pathway
tho03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SP60_04825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tho03400]
    SP60_04825
Enzymes [BR:tho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SP60_04825
DNA repair and recombination proteins [BR:tho03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SP60_04825
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 AAA_22 AAA_19 zinc-ribbons_6 PIF1 T2SSE AAA_16 zf-CHY PolC_DP2
Other DBs
NCBI-ProteinID: ALE52592
UniProt: A0A0M4PN90
Position
complement(897426..899387)
AA seq 653 aa
MPIIEVAIAVPLNKTFDYQSDHEVAVGARVKVPFGAKKVIGIALANKDKSDFNKLKSIVE
VLDEMPILDKPILDFLFWAAKYYHHPVGEVLLAAMPKNLRLGKEAKIKKVIGLPLKTSQP
DFEITQEQTLAIEAILAEQHKYHGFLLHGVTGSGKTEVYLRITQEVLNQGQQVLVLVPEI
GLTPQMIARFEQRLKTRVVAIHSQLNETQKLDAYLMAKSGDAGVVLGTRSAIFAPMPNLG
MIIIDEEHDGSFKQQSSFRYSARDLSFIRAKQVGIPLILGTATPSLETLKNAMDNKLTRL
TLANRAGGVVMPKVSLIDMRSHTDGALSKLLVEKMQQYLSKGKQVMLFINRRGYAPVYFC
TECSWKSECNHCHASMIYHRHINRLKCHHCGDEQMPEQACPECGEQSLEVYGYGTERLEE
TLGSHFADTPIIRIDRDTTRRKKALAEHLEKINSGEPCIIVGTQMLAKGHDFSNLAMVGI
LDIDGGFLSTNFRATEYLAQLLIQVSGRAGRSGDQGEVAIQTRYPDHPMFHYVLSNRYTQ
FASGLLKQRQSAMMPPFAHQALLCANAKNKQNAEDFLREVAGLLKSVKLDTVEIWGPVAN
SIEKKADYYYFNLYLQSNDRKALHQMLATFSQHIDTIKLKNKVRWYLDVDPID
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgccaatcattgaagttgctattgccgttccattaaacaaaacttttgattaccaaagt
gatcatgaagttgctgttggcgcgcgtgttaaagtgccttttggtgctaaaaaagtcatt
ggaattgcgcttgccaataaagataaaagtgattttaacaagctgaaatctatcgtggaa
gttctggacgaaatgccgattctggataaacccattctggattttcttttttgggcagct
aaatattatcaccatcctgttggcgaggtgttgttggcagccatgcccaaaaatttgcgt
cttggcaaagaagcaaagatcaaaaaagttattggcttgccgcttaaaaccagccagcct
gactttgaaattacccaggagcaaacactagctattgaagccattttggctgaacaacat
aagtatcacggctttctgcttcacggtgttaccggcagtggaaaaactgaagtttacctg
cgcatcacccaagaggtgcttaatcaaggtcaacaagtattagtattggtaccggaaatc
ggcctaacgccacaaatgatagcgcgctttgaacagcgcctaaaaacccgtgtcgtagct
attcactcacaactaaatgaaacccaaaagcttgatgcttatcttatggccaaaagtgga
gacgctggtgtggttttaggcacacgaagcgccatctttgcgcccatgccaaatcttggc
atgattattattgatgaagagcatgacggctcatttaagcaacaatcaagctttcgttat
tcagcgcgagatcttagctttattcgtgccaagcaagttggaattccgctgatattaggt
acagctacgccgagcttggaaactttaaaaaacgctatggataataagctcacgcgccta
actttggccaatcgagctggtggcgtggtgatgccaaaagttagcctgattgacatgcgc
tcgcatactgatggtgctttgtctaaactgctcgttgaaaaaatgcagcaatacttgtct
aaaggcaagcaagtgatgttgtttattaacaggcgtggctatgcgccagtttacttttgt
acagaatgtagttggaaatctgagtgtaaccattgccatgcttccatgatttatcatcga
catatcaatcgactcaagtgtcaccactgtggcgatgaacaaatgccagaacaagcctgt
cctgagtgtggcgaacaaagcttagaggtttatggttacggtacagaacgactcgaagaa
accctaggttcacactttgccgatacgcctattatccgtattgatcgcgacaccacacga
cgcaaaaaagccctagccgaacacttagaaaaaattaattctggtgagccatgcattatt
gttggcacgcaaatgttggccaaaggccatgacttttctaatttagccatggtgggtata
ttggatattgatggtggttttttatccaccaatttccgtgccactgaatatttggcgcag
cttctgattcaagtttcagggcgtgctggtcgcagtggcgatcaaggcgaggtggcgatt
caaacacgctacccagatcatccaatgtttcattatgtcctttcaaatcgctatacacaa
tttgccagtggcctacttaagcagcgacaaagtgccatgatgccaccattcgctcatcaa
gcgttgttatgtgcgaatgctaaaaataaacaaaatgctgaggattttttgcgcgaggtg
gccggtctcttaaaaagtgttaagcttgatacggtagaaatttgggggcctgtagccaat
tcaattgaaaaaaaggcagattattattacttcaatttgtacttgcaatcaaatgacaga
aaagcacttcatcaaatgctcgccacttttagccagcacattgataccatcaagcttaaa
aataaagttcgctggtatttagatgtagatccgattgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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