KEGG   Thermococcus sp. 2319x1: ADU37_CDS04620
Entry
ADU37_CDS04620    CDS       T04245                                 
Name
(GenBank) Transcription initiation factor B
  KO
K03124  transcription initiation factor TFIIB
Organism
thv  Thermococcus sp. 2319x1
Pathway
thv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:thv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ADU37_CDS04620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thv03021]
    ADU37_CDS04620
Transcription machinery [BR:thv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     ADU37_CDS04620
 Prokaryotic type
  Archaeal type
    TFB
     ADU37_CDS04620
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Sigma70_r4 zf-RRN7 HARE-HTH A2L_zn_ribbon Prim_Zn_Ribbon GerE HTH_Tnp_ISL3 OrfB_Zn_ribbon FtrD-like LysW-like_globular Lar_restr_allev RB_B FYDLN_acid Zn_Tnp_IS1595 Trm112p Ribosomal_S27e Auto_anti-p27
Other DBs
NCBI-ProteinID: ALV62161
UniProt: A0A0U3SWR8
Position
407824..408723
AA seq 299 aa
MTKHRVCPVCGSEKFVYDPERGEVICANCGFVIQENIIDMGPEWRAFDASQREKRSRTGA
PESILLHDKGLSTDIGYDRNVKGLMREKIYRLRKWQSRLRVSDAAERNLAFALSELDRLG
ARLNLPKHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIADIAK
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKTKRRAIELLEKAYEMG
LTSGKSPAGLVAAALYIAGLLEGEKRTQREVAEVARVTEVTVRNRYKEIVEKLGLKLPL
NT seq 900 nt   +upstreamnt  +downstreamnt
gtgactaagcatagggtttgcccagtttgcggttccgagaagtttgtttatgaccccgaa
aggggagaggtaatctgtgcaaattgtggttttgtaattcaggagaacattattgatatg
ggtcccgaatggagggcatttgacgcttctcaaagggagaagcgttctaggactggtgcg
cctgagagcattctgctgcacgataagggcctttcgacggatattggttacgacagaaat
gttaagggcttgatgagggagaagatttaccgtctcaggaagtggcagagcaggttgagg
gttagcgatgccgccgagagaaatcttgcttttgccttgagtgagctcgacagacttggt
gcgaggttaaaccttccaaagcacgttgaagaagaggctgcgaggctttacagggaggcc
gttagaaaaggccttattaggggcaggtcgattgagagtgttattgctgcctgcgtttac
gctgcatgcagactcttgaagattccgagaactctcgatgaaattgcagatattgccaag
gtcgacaagaaagaaattggcaggagcttcaggttcattgcgaggaatttgaatttgact
cccaagaagctcttcgtgaagccgactgattacgttaacaagtttgccgatgagctcggc
ttaagtgagaaaaccaagagaagggcaatagagctccttgaaaaggcttacgagatgggc
ttgacgagtggtaaaagccctgctggccttgttgctgctgcactttacatagccggtctt
ctcgaaggagagaagagaactcagagggaagtggcggaagtggcaagagtaacagaggtc
acagtaagaaacaggtacaaagaaatagtagagaaactagggctaaagctcccactttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

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