KEGG   Thiomonas intermedia: Tint_2610
Entry
Tint_2610         CDS       T01227                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
tin  Thiomonas intermedia
Pathway
tin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tint_2610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tin03021]
    Tint_2610
   03400 DNA repair and recombination proteins [BR:tin03400]
    Tint_2610
Enzymes [BR:tin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Tint_2610
Transcription machinery [BR:tin03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Tint_2610
DNA repair and recombination proteins [BR:tin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Tint_2610
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N
Other DBs
NCBI-ProteinID: ADG31951
UniProt: D5X634
Position
complement(2781591..2782577)
AA seq 328 aa
MQTALLRPKSIQVESLGHNRSKVVLEPFERGYGHTLGNALRRVMLSSLVGYAPTEVSING
VLHEYSVVDGLQEDVIGVLLNLKGVVLKLHNRDEVTLSLRKEGEGVVTAADIQTPHDVEI
VNPDHVIAHLSQGGKLDMQIKVEKGRGYVPGTLRNFGEEGGKSIGHIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMEIETNGVISAEEAIRSSARILVEQLSVFASLEGAETTEAAE
AAAGGQTYDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRSETELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLDNWPPSGLDKR
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcaaactgcacttcttcgccccaagtcgattcaggtcgaatctctcggtcacaaccgt
tccaaagtggtgctcgaacctttcgagcgcggctacggccacacccttggcaacgcgttg
cgccgcgtcatgctgtcgtcgctggtgggttacgcgccgaccgaggtcagcatcaacggc
gtgctccacgagtattccgtggtcgacggcctgcaggaagatgtgatcggcgtgctgctc
aacctcaagggcgtggtgctcaagctgcacaaccgtgacgaagtcaccctgtcgctgcgc
aaggaaggcgaaggcgtggtgactgcggctgatattcagacgcctcacgatgtcgagatc
gtcaacccggatcacgtgatcgcgcatctgtcgcaaggcggcaagctcgacatgcagatc
aaggtcgaaaagggtcgtggctacgtccccggtaccctgcgtaatttcggcgaagaaggc
ggcaagagcattggccatatcgtgctcgacgcttcgttctcgccggtgcgccgcgtcagc
tatgccgtggaaagcgcccgcgtggagcagcgtaccgatctggacaagctggtcatggaa
atcgagaccaacggcgtgatcagcgcggaagaagccattcgttcgtctgcgcgcattctg
gttgagcagttgtcggtgttcgccagcctggaaggcgccgagacgaccgaggccgccgag
gcggctgcgggtggacagacttacgatccgatcctgctgcgcccggttgacgagctcgaa
ctgacggtgcgctcggccaactgcctcaaggccgagaacatctattacatcggcgacctc
attcagcgtagcgaaaccgaactgctcaagacccccaacctgggccgcaagtcgctcaac
gaaatcaaggaagtgctcgccgcgcgcgggctgacgctgggcatgaagctcgacaactgg
ccgcccagcggcttggacaagcgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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