KEGG   Thioalkalivibrio sp. K90mix: TK90_2010
Entry
TK90_2010         CDS       T01174                                 
Name
(GenBank) ATP-dependent DNA helicase RecG
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TK90_2010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tkm03400]
    TK90_2010
Enzymes [BR:tkm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TK90_2010
DNA repair and recombination proteins [BR:tkm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TK90_2010
SSDB
Motif
Pfam: DEAD Helicase_C RecG_wedge RecG_dom3_C ResIII IstB_IS21 AAA_30 SecA_DEAD SNF2-rel_dom AAA_16 SLFN-g3_helicase PhoH IMS_HHH Cdd1
Other DBs
NCBI-ProteinID: ADC72501
UniProt: D3SC01
Position
2133644..2135707
AA seq 687 aa
MDLQTPLTGFKGVGPAVAERLARLGLEQARDLLLHLPLRFEDRTRLTPIRALRPGLSALF
EGRVTHAEVVHRRRRMLVVTLEEDGASILLRFFHFGSGQQRRLSPGTRIRAFGEPRGMPG
AMECVHPELQVVGTKPPVLETHLTPIYPTTEGISQKLLRQLVTEALPTTEQLPDLLPELN
QRQLPGLHTALQQLHHPPARAEVLDALDTAEQRGPARTRLALEELTAHQLARMEQNRTPQ
DARRAPVIRPAGALWRQLRDQLPFAPTSAQERVIHEVREDLARPTPMNRLVQGDVGSGKT
LVAVAAALAAVEAGHQVAFMAPTELLARQHGRNLAQWLEPLGVSVAWLGGRQGASERGQL
LSELASGHRQVAIGTHALFQEEVRFHRLGLAIIDEQHRFGVHQRMALRDKGNGQMPHQLI
MTATPIPRTLAMALYADLDSSVIDERPPGRTPVRTALISHERRDEVIDRIRAACGSGTQA
YWVCPLVEESEQLEAESAEATAERLREALPELSIGLAHGRMKGPERDTVMERFRAGALDL
LVATTVIEVGVDVPNASLMIIENAERMGLSQLHQLRGRVGRGNTASACVLLYRPPLGETA
RERLEAMRRTDDGFEIAEVDLRLRGPGELLGTRQTGDRSFRVADWSRDQDLLEEATELAL
RMREDPPRAAALIERWLGSATRYATVG
NT seq 2064 nt   +upstreamnt  +downstreamnt
gtggacctgcagacgccgctgacggggttcaagggtgtcggccccgcggtggccgagcgc
ctggcccgtctgggcctggaacaggcccgggacctcctcctgcacctgccactgcgtttc
gaggaccgcacccggctgaccccgatccgcgccctgcgcccgggactgtccgccctgttc
gagggccgggtcacccacgccgaggtcgtccatcgccgccgccgcatgctggtggtcacg
ctggaagaggacggcgcgtccatcctgctgcggttcttccatttcggcagcggccagcag
cgccgcctgagcccgggtacgcgcattcgcgccttcggcgaaccgcgcggcatgcccggc
gcgatggagtgcgtgcacccggaactccaggtggtaggcacgaaaccacccgtgctggaa
acccacctcaccccgatctatccgacgaccgagggcatctcgcagaagctcctgcgtcag
ctggtcaccgaggccctgccgacgaccgagcagctgcccgacctgctcccggaactgaac
cagcgccagctacccgggctgcacacggccctgcagcagctgcaccaccccccggcacgg
gccgaggtcctggatgcactggacaccgccgagcagcgcgggcccgcgcgcacccgcctg
gcactggaggagctgaccgcccaccagctcgcccgcatggaacaaaaccgcaccccacag
gatgcgcgccgcgcgccggtcatccgtcccgcgggcgcgctgtggcgacaactgcgcgac
cagctcccgttcgcacccaccagcgcacaggagcgcgtgatccacgaggtgcgtgaggac
ctggcccgcccgaccccgatgaaccggctggtgcagggcgacgtcggctccggcaagacc
ctggtcgcggtcgcggccgccctcgcggcagtggaagccggccatcaggtcgcattcatg
gcccccaccgagctgctcgcccgtcagcacgggcgcaatctcgcccagtggctggaaccg
ctgggcgtttcggtggcatggctgggcggacgccagggcgccagcgagcggggtcagttg
ctttcggaactggccagtggccatcgccaggtcgcgatcggcacccacgccctgttccag
gaagaggtccgcttccaccgcctgggactggcgatcatcgacgagcagcaccgctttggc
gtgcaccagcgcatggccctgcgcgacaagggcaatggccagatgccgcatcagctgatc
atgaccgcaacaccaatcccgcgcacgctggccatggccctgtatgccgacctggacagc
tcggtcatcgacgagcgtccgccggggcgcacgcccgtgcgcaccgcactgatcagccac
gagcgtcgtgacgaagtgatcgaccgcatccgtgccgcctgcggctccgggacccaggcc
tactgggtctgcccgctggtggaggaatccgaacaactggaggcggaatccgccgaagca
accgccgaacgcctgcgcgaggcgctgccggagctgagcatcggactggcccacgggcgc
atgaaggggcccgagcgcgatacggtgatggaacgctttcgtgccggcgcgctcgatctg
ctggtcgccaccacggtgatcgaggtcggcgtggatgtccccaatgcgagcctgatgatc
atcgagaacgccgaacgcatggggctgtcacagctgcaccagttgcgtggccgtgtcggg
cgcggcaacaccgcctctgcctgcgtgctgctttaccgcccgccgctgggcgaaaccgcc
cgcgagcgcctggaggcgatgcgccggaccgacgacggcttcgagatcgcggaggtggac
ctccggttgcgcggccccggcgagctgctgggcacgcgccagacgggcgaccgcagcttc
cgtgtggccgactggtcgcgcgatcaggacctgctggaggaggccacagagctggccctg
cgcatgcgcgaggacccgccacgcgcggcggccctgatcgaacgctggctgggcagcgcc
acgcgctacgccaccgtcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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