KEGG T00226: TK2215

Thermococcus kodakarensis: TK2215

Entry

TK2215            CDS       T00226

Name

(GenBank) archaeal tRNA-intron endonuclease

K01170

tRNA-intron endonuclease, archaea type [EC:4.6.1.16]

Organism

tko Thermococcus kodakarensis

Brite

KEGG Orthology (KO) [BR:tko00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tko03016]
    TK2215
Enzymes [BR:tko01000]
4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     TK2215
Transfer RNA biogenesis [BR:tko03016]
Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    TK2215

SSDB

Motif

Pfam:

tRNA_int_endo tRNA_int_endo_N tRNA_int_end_N2 Sen15

Other DBs

NCBI-ProteinID:

BAD86404

UniProt:

Q5JHP5

Position

2003076..2003582

AA seq 168 aa
MIIFYLSGDRVFSTDQNAINGLYNKRYFGKVVEGKLFLSLLEAAYLVERGKIEVRDGKRK
LSLEEIMNLGRARDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMEEHSEWLVW
VVPENSRLSPNDITARVRVAHGVRKNMIMAIVDEDADVTYYKVEWVKF

NT seq 507 nt +upstreamnt +downstreamnt
atgataatcttctacctgagcggcgacagggtcttctcaaccgatcagaacgcgataaac
gggctctacaacaagcgatactttggaaaggtcgttgagggtaagctgtttctatctctt
ctagaagcggcctatctagtggagcgcggcaagattgaggtcagggacggcaagaggaag
ctctcgcttgaggagataatgaacctcggcagggccagggatgagctctttgatgcaaaa
tatctcgtctacaaggacctgagagataggggctacactgtgaagtccggcctgaagttc
ggctcccacttcagggtctaccggaggggaatggaagagcactccgagtggctcgtctgg
gttgtccccgagaactccaggttaagtccaaacgacataaccgctcgcgtcagggtggct
cacggcgtgaggaagaacatgataatggcgatagttgacgaggacgccgacgtgacctac
tacaaggtcgagtgggtgaagttctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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