KEGG   Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0590
Entry
US01_C0001G0590   CDS       T04457                                 
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase, formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tmg  Candidate division TM6 bacterium GW2011_GWF2_28_16
Pathway
tmg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    US01_C0001G0590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmg03400]
    US01_C0001G0590
Enzymes [BR:tmg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     US01_C0001G0590
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     US01_C0001G0590
DNA repair and recombination proteins [BR:tmg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     US01_C0001G0590
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zf-RING_7 NFACT_N Auto_anti-p27
Other DBs
NCBI-ProteinID: AKM81536
UniProt: A0A0G4B0N5
Position
complement(572313..573176)
AA seq 287 aa
MPELPEVESIRRKLNVVLANRQIQQIEVLRDKSFLAFPIFGQEISNQTVVEVKRRAKILQ
IVISGERDLLIHLKMTGQLIFVDVDGKRAGGGHPTADWVNDLPAKHTRVIFNFTDGSRLF
FNDMRVFGWIRSPLKIDVSKEFVNYGPDIDDPNLTADYLIDLAKKRQIPIKQFIMDNKVI
CGVGNIYASESLFAVSLNPKIPAKEINPKQMKKLLQAMQKIIERSTQLGGTTFDGKYVGV
DGFAGGFQNELKVYGREGQPCLKCGSKIIRIKQGGRGTFYCPSCQCI
NT seq 864 nt   +upstreamnt  +downstreamnt
atgccagaacttccagaagttgaatctattcgtcgcaaacttaatgtagttttagcgaat
cgacaaattcaacaaattgaagttttacgtgacaaaagttttctggccttccctattttt
ggtcaagaaatttcaaatcaaactgttgtagaagttaagcgccgcgccaaaattttacaa
attgtaatcagtggtgagcgcgatcttttaattcacttaaaaatgactggccaattaatt
tttgtcgatgttgatggcaaaagagccggcggcggtcatccaactgctgattgggtcaat
gatctgccagctaagcacactagagtgatttttaattttactgacggctcgcggcttttt
ttcaacgacatgcgtgtttttggctggatccgctcgccgcttaaaattgatgttagcaaa
gaatttgtgaattatggtccagatattgatgacccaaatttgactgcagattacttaata
gaccttgctaaaaagcgtcaaatcccgataaaacaatttattatggataacaaagttatt
tgtggagtaggaaatatttatgctagtgaatcgctttttgcggttagccttaatccaaaa
attcctgccaaagaaatcaacccaaaacaaatgaaaaaattactccaggccatgcagaaa
attattgaacgttctactcagttaggtggcacgacttttgatggtaaatatgtgggagtt
gatggttttgcaggtggttttcaaaacgaattaaaagtttatggacgagaaggtcagcct
tgtttaaagtgtggcagcaaaattattagaattaaacaaggtggtcgcgggacgttttat
tgtccaagctgtcagtgtatttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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