KEGG T02976: THEMA

Thermotoga maritima MSB8: THEMA_02385

Entry

THEMA_02385       CDS       T02976

Name

(GenBank) DNA polymerase III subunit alpha

K02337

DNA polymerase III subunit alpha [EC:2.7.7.7]

Organism

tmi Thermotoga maritima MSB8

Pathway

tmi03030

DNA replication

tmi03430

Mismatch repair

tmi03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:tmi00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THEMA_02385
   03430 Mismatch repair
    THEMA_02385
   03440 Homologous recombination
    THEMA_02385
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmi03032]
    THEMA_02385
   03400 DNA repair and recombination proteins [BR:tmi03400]
    THEMA_02385
Enzymes [BR:tmi01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     THEMA_02385
DNA replication proteins [BR:tmi03032]
Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     THEMA_02385
DNA repair and recombination proteins [BR:tmi03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     THEMA_02385

SSDB

Motif

Pfam:

DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP CRISPR_Cas2

Other DBs

NCBI-ProteinID:

AHD17781

Position

453856..456384

AA seq 842 aa
MIPWVISPYSFDGSVVRFEKLALLLKRKGLKSVILADRNFHAAVKFNTIMRKHGLIPVHG
LWKDGRIFVARNREEFDSLVRYYNGETHEIEDIPVFQESELTPVRYLDASEKKASIFMRK
IFGLDEDVQGFPEKCEDVADILNAEAYDLRVNHRFPTPPKNWNELLIKKAEPLGEEYISR
LKRELEVIKRKGFTPYIYTVEKVVEIAKKMGIKVGPGRGSAVGSLVAYLCGITEVDPIKY
DLLFERFLNEERQEPPDIDVDVEDRRRKDLIKELSKSFQVYQVSTFGNLTEKSLKNLINS
VLPDASLEEKNEIYKTVYGLPHHPSVHAAGVVISENPLPLPTRTEEDIPITDYDMYDLQE
IGVVKIDILGLKTLSFIKDFKKEIFDYSDEKTYHLISKGKTLGVFQLEGLQARKLCRRIS
PRNMDELSILLALNRPGPLRSGLDVMFSNSKNVPAFFRKMFPETRGVLIYQEQIMRLAMF
AGLSGTEADILRRAIAKKEREKMEPLLEKMKKGLLEKGMENAEQILEILLNFSSYAFNKS
HSVAYAHITYQTAYLKAHHLEEFFKLYFAYNSSDAGKIFLAVQELRNEGYRVHPPDINIS
GKDLVFHGKDVYLPLTVVKGVGVTLVEQIEKIRPVSSVRELQERVTGVPRNVVESLITAG
AFDKLYENRKLALEELNKRVEKDILEIRSLFGEKVEQESSNIKIGDITELEEKSMGFPLT
PVHEVPTGLFARIDDVFTYGRILPVLVKRVSRNIVTDGLSVCRVRTDVPDGVHLVLLSPL
QKIIKIWPFNENTRFVYRVDFTATLEKAGQNEITEVLKNGAVVRYEGYRPLTDEYRYRVV
PR

NT seq 2529 nt +upstreamnt +downstreamnt
atgattccatgggtgatatctccctattctttcgatggctcagtcgttcgattcgaaaaa
ctggcccttctcttgaaaagaaagggactgaaatcagtcatcctcgccgacagaaacttc
cacgccgccgtgaagttcaacacgatcatgaggaaacacggcctgataccggttcacggt
ctctggaaagacggcagaatcttcgtcgcgagaaacagagaggaattcgacagcctggtc
aggtactacaacggagaaacacatgaaatcgaagacatacctgttttccaagaaagcgaa
ctaacacctgtgagatatctcgatgcctctgaaaaaaaggccagcatcttcatgagaaag
atcttcggactcgacgaagacgttcagggttttccagaaaaatgtgaagatgtggccgac
attctgaacgcagaagcctacgatctcagagtgaatcacagatttcccactcctcctaaa
aattggaacgaattactaataaaaaaggcagaaccattgggtgaagagtacattagccgt
ctgaaaagagaactcgaggtgataaaaagaaagggtttcaccccgtacatctacacggtg
gaaaaagtggtagagatcgcaaagaaaatgggcataaaagtcggtcctggaagaggaagt
gcggttggttctctcgttgcatacctgtgcggaataacagaggtagatccaataaaatac
gaccttctcttcgaacgcttcttgaacgaagaaaggcaggaaccacccgatatagatgtg
gatgtggaagacaggagaagaaaagacctgataaaggaattatcaaagtcttttcaagtc
tatcaagtttcaaccttcggaaacctcacagagaaatctctgaaaaacctcataaactcc
gttcttccagatgcgtctcttgaagagaaaaacgaaatctacaaaaccgtttacggactg
ccgcaccaccccagtgttcacgccgcgggagtcgtgatctcagaaaaccctctgccacta
cctacaagaacagaagaagatatcccgataacggactacgacatgtacgatcttcaagaa
ataggtgttgtgaagatcgatatactgggtcttaaaacactctcgttcataaaggatttc
aaaaaagaaattttcgattactcggatgaaaaaacgtatcatctcatctccaagggaaaa
actctcggtgtgtttcagctcgaaggtctccaggcaagaaaactatgcagaagaatctct
cccagaaacatggacgaactctccattctccttgccctcaacagacctggtccattgagg
tctggcttggacgttatgttttcgaattcgaagaacgttcccgcgtttttcaggaagatg
tttccagagacaagaggggttctgatctatcaggaacagatcatgcgactcgccatgttc
gcgggcctctcaggcaccgaagcggatattttgagaagggccattgcaaagaaagaaaga
gaaaaaatggaacctctccttgaaaagatgaaaaaaggccttcttgaaaaaggcatggaa
aacgcagaacagattctcgagatcctcctgaacttttcctcttatgccttcaacaaatcc
cacagcgtcgcgtacgcccacatcacataccagacggcatatttgaaagcccatcatctt
gaagaatttttcaaactctactttgcgtacaattcttccgacgctggaaagatcttcctt
gccgttcaggaactgagaaatgaaggatacagggtgcatcctccagatatcaacatctct
gggaaagatctggtctttcacggtaaagacgtttaccttcccctgacggttgtgaaagga
gtgggcgtgaccctggttgaacagatcgaaaaaatcaggccggtcagcagtgtgagggaa
cttcaggagagggtaaccggagttccgagaaacgttgtggaaagcttgatcacagcaggc
gccttcgacaaactttatgaaaacagaaaactagcactagaggaactgaacaaaagggtg
gaaaaagatattctggagattcgaagcctcttcggagaaaaggtagagcaggaaagttca
aacatcaaaataggagacatcaccgagctcgaggaaaagagcatgggattcccgttgaca
cccgttcatgaagttcccacaggactctttgcccgtatagacgatgtcttcacgtatggt
aggatccttcctgtgcttgtcaaaagagtttcgagaaacatcgtgacggatggtctttcc
gtttgccgtgtgagaacagacgttcccgatggtgttcaccttgtactcctttctcccctc
cagaagatcataaaaatctggcccttcaacgaaaacaccaggttcgtgtacagagtggat
tttaccgcgacactggaaaaggctggtcaaaacgagataacggaagtccttaaaaacggg
gctgtcgtaaggtatgaaggatacagacctctaacggatgaatatcgctacagagtcgtt
ccccgatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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