KEGG   Tuber melanosporum: GSTUM_00005082001
Entry
GSTUM_00005082001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
tml  Tuber melanosporum
Pathway
tml00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    GSTUM_00005082001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tml01007]
    GSTUM_00005082001
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tml03016]
    GSTUM_00005082001
Enzymes [BR:tml01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     GSTUM_00005082001
Amino acid related enzymes [BR:tml01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   GSTUM_00005082001
Transfer RNA biogenesis [BR:tml03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    GSTUM_00005082001
 Prokaryotic type
   Other AARSs
    GSTUM_00005082001
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 9188536
NCBI-ProteinID: XP_002837102
INRA: GSTUM_00005082001
UniProt: D5G9V0
AA seq 500 aa
MNVKSVVEICREYEHIVAGCGGGDESVSIDKLVTIRGRIKNYREVSSKLIFYDLVQDGEK
IQVVVNCARVGGEKGEFRRISMLTRIGDVVSVTGYPGRTKAGELTIFATAHLQILAPSLH
VPPQTILDLETRLRNRHVDLMVRPVAGQILRLRSHIIQHIRDFFISRDFVEVQTPILSDT
FGGAVAKPFLTEATSVCRGKQLALRIAPELWLKRLVIGGLDRVFEIGTQFRNEGVDNTHN
PEFTTCEFYQAYAGLEDIINTTEELLSGMARKVSELKARKLKDIPEIETDFTAPFQRLEF
IPALEASMGHKLPVLHGNTEAVTLELLSLFKTLSLPTPPMTTIPRLLQKLSSEYLEPQCM
KPTFITNHPETLSPLSKTSLLHGQRVSSRVELFVDGKELVNAYEEENSPTEQRRKFVMQA
GWKDEDVIERGEDGEGVVDEAYCQALEWGLPPTGGWGIGIDRLVMVFAGAERIADVLAFG
GLRGAVNLGDGVRGTKEEGE
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgaacgtaaagagcgtagtcgagatatgtagggagtatgagcacatcgttgcgggatgc
ggcggtggcgatgagagtgtttctattgataaattggttaccataagaggcaggatcaag
aattaccgggaagtgagctcgaaattgatcttttacgatctcgtccaggatggggagaag
attcaggttgtggttaactgcgcgagggtgggcggggagaagggggaattcaggaggatc
tcgatgctgacgaggattggggatgtcgttagtgtgacgggctatccaggccgtaccaag
gccggggagctcactatctttgcaacagcgcatctacagattctagctccctccctccac
gtcccgccacaaacaattctggatctggaaacacgcctccggaatcggcatgtggaccta
atggtccggcctgtggccggacaaattctcagacttcgctcccacatcatccagcacatc
cgcgacttcttcatctcacgagacttcgtagaagtccagacgccaatactgtcggatact
ttcggcggcgcggtagcaaagcccttcctaacagaggccacgagtgtctgccgtgggaag
caactggccttgcgtattgcgccagagctatggctgaagcgcctcgtcattggcggccta
gaccgtgtctttgaaataggcacgcaattccgcaacgagggagtcgacaacacgcacaat
cccgagttcaccacgtgcgagttctaccaagcgtacgcgggactggaagatatcatcaat
acgacggaggagctactctcgggcatggcacggaaggtctcggagttgaaagcgagaaag
ctaaaagacatcccagagatagaaacagacttcacggcacccttccaaagactcgagttc
atcccggcgctggaagcatccatgggacacaaattgcccgtcctgcatgggaacaccgaa
gcagtgacgctggaactgctctccctcttcaagacactctccctccccacacccccaatg
acaacaatcccgcgcctcctccagaaactctcctcggaatacctggagccgcaatgcatg
aagccaacgttcataacaaaccaccccgaaaccctctcgccgctatcgaaaaccagccta
ttgcacggccagcgcgtgtcctcgcgcgtggagctgttcgtggacgggaaggagctggta
aatgcctacgaagaggagaactctccgacggagcagaggcgcaagttcgtcatgcaggcc
gggtggaaggacgaggatgttattgagcgcggggaggacggggagggggtggtcgatgag
gcctattgccaggcactcgagtggggcttgcccccgactggtgggtgggggatcggtatt
gatcgattggttatggtcttcgcaggggccgagaggattgctgatgtgttggcgttcggg
ggcttgaggggggcggtcaatctaggcgatggggtgcggggtacgaaggaggagggagag
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system