KEGG   Phaeoacremonium minimum: UCRPA7_8701
Entry
UCRPA7_8701       CDS       T03102                                 
Name
(RefSeq) putative exosome complex exonuclease rrp41 protein
  KO
K11600  exosome complex component RRP41
Organism
tmn  Phaeoacremonium minimum
Pathway
tmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UCRPA7_8701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmn03019]
    UCRPA7_8701
Messenger RNA biogenesis [BR:tmn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     UCRPA7_8701
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     UCRPA7_8701
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF4813
Other DBs
NCBI-GeneID: 19329579
NCBI-ProteinID: XP_007919403
UniProt: R8B971
Position
Unknown
AA seq 272 aa
MPLDTSAYSLALLRVDGRRWNELRRCHAQIRTQAAADGSSYLEMGNTKVMCVVNGPTEPR
RGGAGGGGGASEQTKEAQVIVSIVVAGFSSVDRKRRGRGDKRIQEMQTTISRALSSTLHT
HLFPHSTINVSLHVLSQDGSLLAALINASALAAIDAGIPMTDYVAACTAGSTSSYAANDE
AADPLLDLNQQEEQELPSLTVATLGESDKVVVLVCESRVQVARLEGMLAVGVDGCKQVRE
ILDQVVREKGGRMVREGVVEKGVGVGDMDIDG
NT seq 819 nt   +upstreamnt  +downstreamnt
atgccgctcgacacctcggcctactccctggcgctgctgcgagtcgacggccgccgctgg
aacgagctgcgacgatgccatgcccagatccgcacccaggctgctgccgatggctccagc
tacctcgagatgggcaacacgaaggttatgtgcgtggtgaacggaccgactgaacctcgg
cgaggtggcgcgggaggaggtggcggcgcaagcgagcagaccaaagaggcgcaggtcatc
gtgagcatcgtcgtcgcgggtttcagctccgtcgaccgcaagcggcggggacggggcgac
aagcgcatccaggaaatgcaaacgaccatctcgcgcgccctctcgagcacgctgcacacg
cacctcttcccgcactcgaccatcaacgtctcgctgcacgtgctcagccaggacggctcg
ctgctggcggcgctgatcaatgcgtccgcgctggcggccatcgacgccggcatcccgatg
acggactacgtcgccgcctgcacggcgggcagcacctcgagctacgcggccaacgacgag
gccgccgacccgctgctggacctcaaccagcaggaggagcaggagctgccgagcctgacg
gtcgcgacgctcggcgagagcgacaaggtcgttgtgctcgtgtgcgagagccgggtgcag
gtcgctaggctggagggcatgctcgctgtcggtgttgacggatgcaagcaggtgcgagag
atcttggaccaagtagtgagagagaagggaggacgtatggtgcgagagggagtggtagag
aaaggcgtgggcgtcggggatatggacatcgacggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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