KEGG   Tremella mesenterica: TREMEDRAFT_25331
Entry
TREMEDRAFT_25331  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
tms  Tremella mesenterica
Pathway
tms04111  Cell cycle - yeast
tms04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TREMEDRAFT_25331
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    TREMEDRAFT_25331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_25331
Ubiquitin system [BR:tms04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     TREMEDRAFT_25331
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 F-box-like Nup160 WD40_like PQQ_3 PQQ_2 F-box PAN2_N Cytochrom_D1
Other DBs
NCBI-GeneID: 18491482
NCBI-ProteinID: XP_007000616
JGI: Treme1_25331
Position
Unknown
AA seq 533 aa
MGKFKLLSKGQRFAFLSTLVPELLLPEALVVARRIDPRLKRDFLKDLPLELSLHCLSFVE
DARTLARASQVSQYWYALLQDETTWKHMCTRTRFFPLVSPFPSHSSHSRTSRRFDNPFVS
RVPHSNLRLQMGRVSLNPLAQNFITTPRFARLAELGSVRPMSPPTTPRSFKQQFKDAYLT
ESNWLTGGQLIASHKHTDDGVVTSLAIDDTFIVVGMANSQIEVYDSRTGAWLNSLKGHEA
GVWALIDLCGAAMGYGSDKHLVVSGGCDRNVRVWDANTGQCLHVLRGHSSTVRCLKVIDG
KPLAITGSRDWTLRVWDIERGRCVHILQGHQQSVRCVEVAGNIAATGSYDFTCRLWNVET
GQCLRVLVGHYHQIYAIAFDGERVVTGSLDSTVRVWDAATGTCMALLQGHTSLVGQLQLT
SDTLVTGGSDGRVIIFDLTTLTCLHRLCAHDNSVTCLQFDDRYIISGGNDGRVKLWDMRT
GAFIRELTRRCDAVWRVNFRDDRCVILLQRGGRTVLEVLSFRAGEKGGERITT
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgggaaaattcaagttgttgtcaaagggtcaaagatttgcttttttgtcaactctcgta
ccggagttgttattacccgaagctttggtagtggcaaggaggattgatccgagattgaag
agagactttttgaaggatctgccattggaattgtcgttgcattgcctgtctttcgtcgaa
gatgctcgtactcttgcccgtgcctctcaagtatcccaatactggtacgcccttctacaa
gacgaaacgacatggaaacatatgtgcactcgcactcgattcttccctctcgtctcacct
ttcccctctcactcatcacactctcgcacttctcgtcgattcgataatcctttcgtgtcc
agagtcccacattccaatttgagattgcagatgggaagagtgtctttgaaccccttggcc
cagaatttcattacgactcctaggtttgcgcgtttagcagagttaggatctgttagacca
atgtcacctcctacgactccaaggagtttcaaacagcagttcaaggacgcttacctcaca
gaatccaactggttgaccggcgggcaattgatcgcatctcacaaacacaccgacgacggt
gtagtcacttctctagctatcgatgacaccttcatcgttgtcggtatggcgaacagtcaa
atagaagtatacgattctcgtacgggtgcatggctcaacagtctcaaaggacacgaagca
ggtgtttgggctttaattgatctttgcggtgcggctatgggatatggatctgataaacat
ttggtggtttctggaggatgtgataggaatgtcagagtttgggatgcgaacacaggacaa
tgccttcatgttctccgaggtcattcttccactgttcgatgtctcaaagtcattgacggc
aaaccattggccatcaccggttcacgcgattggacactgcgggtgtgggatatagaacgt
ggcagatgtgtacatatcttgcaagggcatcaacagagtgtgagatgtgttgaggtagct
gggaatatagctgcaacggggtcctatgattttacctgtcgattatggaatgtcgagacg
ggacaatgtcttcgagttctcgtaggacattatcaccaaatctacgccattgcctttgac
ggggaaagagtcgtcactggtagtttggattcgaccgttagggtatgggatgcggctact
ggaacatgcatggccctactacaaggtcatacctccctcgtcggtcaattacaactcacc
tctgatacactagtcaccggtggttccgacggtcgtgtgatcatattcgacctcacaacc
ctcacttgtcttcaccgtctttgcgcacatgacaattccgtcacttgtcttcaattcgat
gatcgttatatcatttcaggcggtaatgatggtcgtgtcaaattatgggatatgagaact
ggagcttttatccgtgaactcacaagaagatgtgatgcggtttggagagttaattttagg
gatgatagatgtgtcatcttgttacaaagaggtggaaggactgtattggaggttttaagt
tttagggcgggtgagaaaggtggagagaggattacgacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (55)   

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