KEGG   Tremella mesenterica: TREMEDRAFT_71675
Entry
TREMEDRAFT_71675  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
tms  Tremella mesenterica
Pathway
tms03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TREMEDRAFT_71675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tms03009]
    TREMEDRAFT_71675
Ribosome biogenesis [BR:tms03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TREMEDRAFT_71675
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 18498587
NCBI-ProteinID: XP_007004851
JGI: Treme1_71675
Position
Unknown
AA seq 1048 aa
MEEPIVDADDNHPHRRRRRGKGKGKDISSSGIAPVPPSTSVEEELDQPQAGSSKLPLTSD
QEVSSLGAPGKVVTKRKKSKDRHKLGGENFPGDPKFAEWECIPIARNDVSSVPPIWSKDG
KFFHVVSGTSIHIHSYSAPHFPRLSTLSSTVRDGHQKPITALILSPINPFQLITASLDGT
VKIWDWVEGRLVRTIPVVQDGGVHQLCAGQVGGSWWLFLTTSTRKASSKQQNGGLNYHIH
RILLSPTTKEKTNISIVSKLSKAPVALFISPRNTYLVALAANKAYTFRLPSNPSQTKDWN
MTQVKFVSNQNFTCGAFAPESLLNKEKGEEWFATGDDHGLIRLWHGLDEAFRQLNVAARS
DATPDSLSQTDKRLPTTSLHWHAHAVSAIAFTGTGAQLLSVGEESVLVQWHLASGRREFV
PRLGGKPIVSLSVRPGTRGHEEEWWVTMLDGSTVRVGSASGNINNVGSAIKIDPLHPPSN
PGRYPLAVHPANGAVVLPSSHPSTLQFIDPATSVVSFDLEVAPSNRVSKRDETPLDPVAV
EHVVFSPALDGRSKWMTTVEGRRGNDDEGGMVKTLKFWQWTGEKYVLNTIFPRPHGTSDV
SSLCFSSVTKAQVVAGQMPLLVTTSVDGEAKVWHARQARKSEQVYWSLRSTFSYRSMPIY
SASVSADSTILALAHGPLVTLWDLFSNVLLRVLDSGAFGESQRVGFAGPESRYLVCAGAT
QGLAVWDLLICETLWSAPTKALNHLFTSTSSSDFQILSQPGSKRTLITSFSPTTPRPLST
TSISQTFSAVCQSRNSGFIGISSNSTIYQFGPSISAKTQASQVRAVQPTSEKKLSIWQEM
FGKAAFFDDLTVSELERGTSQTATTQASGSRMDIWEGPSHTLPPTGMLFDAFMDKFLSSR
PVEEDTRDEIDVRRDAISYDVPMDETSDLVLPTVSSQGRIPEKGEMEELQELFRSFVIKP
VGTPDKRVNGKVNGKPNGHTNHVNLLSPPSSSLLVSSNDEDTRVDPIPITPDTTFSTTNG
LVSDDERVLTAGKMKGRGKKRRAPREDD
NT seq 3147 nt   +upstreamnt  +downstreamnt
atggaagagccaatagtcgacgctgatgataatcatccgcatcgtagacgtagacggggg
aagggaaagggtaaagatatcagttcttctggtatagctcccgttccaccctccacttcg
gttgaggaagagctggatcaaccccaagcgggatcgtccaagctgcctctgacttcagat
caggaagtatcctcgttgggagcacctggtaaggtagtaacaaaaagaaagaagtcaaaa
gatcgacacaaactggggggtgaaaattttccgggtgatccaaaatttgctgaatgggaa
tgtatccccatcgctcgtaacgacgtctcatctgtccctcccatatggtcaaaagatggc
aaattctttcacgtagtatctgggacttcaatacatattcactcttactcagcaccacac
tttcctcgactctcgactctctcaagtactgttcgtgatggtcatcaaaagcctatcaca
gcactcattctttcccccataaacccgtttcaactcatcaccgcttccttagacggaacc
gtaaaaatttgggattgggtcgaagggaggctcgtgcgcactatccctgtcgtccaagat
gggggcgtacatcaattatgtgccggtcaggttggcgggtcttggtggttgtttctcacg
acgtccacacgaaaagccagttctaaacaacaaaacggagggctaaactaccacatacac
cgaatccttctgtctccaaccacgaaggaaaagaccaacatttccatcgtttccaaattg
tcaaaagcgccagtggcacttttcatctccccccgtaacacctatctcgtcgcattagct
gctaacaaggcgtacacttttcgattaccatccaatccgtctcaaacgaaagattggaat
atgacgcaagtcaaatttgtgtccaatcaaaatttcacatgtggtgcctttgcccctgaa
agtctcctcaataaagaaaagggtgaagaatggttcgccacgggtgacgaccacggtctt
attcgtctttggcatggcttagacgaagcgtttcggcaactgaatgttgcagccaggtcc
gacgccacaccggactctctctcccaaacagacaagcgccttccaacgacgtcattgcat
tggcatgcccatgcggtgtcagcgatcgctttcacggggactggagcgcagctgttgtct
gtgggcgaggagagcgtcttagttcagtggcatcttgcctccggcagacgggagtttgtg
cctcgcttgggtgggaagcctattgtcagtcttagcgtcagaccggggacaagggggcat
gaagaggaatggtgggtgacaatgttggatggcagcaccgtcagagtgggctccgcctcg
ggtaatatcaataatgttgggtcagctatcaaaatagatcccttacatccaccctcaaat
cctggtcgatatcccctggctgttcacccagctaatggcgccgttgtcctcccttcttct
cacccatccactttgcaattcatcgatcctgctacgtccgtggtgtccttcgatctcgag
gtggctccgtcaaatcgcgtatccaaaagagacgaaactcctcttgatcccgtggccgtg
gagcatgtcgttttctcccccgctttagatggccggtctaaatggatgactactgttgaa
gggcgaagaggaaacgatgacgaagggggcatggtcaaaactctcaaattttggcagtgg
acgggagagaagtacgtactcaacacaatatttccccgtccgcacgggacgagtgatgtg
tcgtctttgtgtttctcatcagtgacgaaagcccaagtggtagcgggacagatgccgcta
ctggtgacgaccagcgtggatggagaggcgaaggtatggcatgctcgtcaggctaggaaa
agcgagcaagtctattggtctctgcgttcgacgttctcatatcggtcaatgccaatctac
tccgcctccgtctcagccgactcgaccatcctcgcacttgctcacggacctctagtcaca
ctatgggacctcttcagtaacgttcttcttagagtgctcgacagcggtgctttcggtgaa
agtcaacgagtgggctttgcgggacctgaaagtcgttatctcgtctgcgctggtgctact
caaggtttggcagtgtgggatctgctgatctgcgagacactctggtcagctccgaccaaa
gctctaaatcacctctttacatcaacatcatcctcagattttcaaatactttctcaacct
ggaagtaaacgaaccctcatcacatccttttctccaacaacaccccgacctctcagcacg
acctccatctcacagacgttctccgccgtctgtcaatcgcgaaactctggcttcatcgga
atttcgtcaaatagtacaatctatcaattcggtccgtccatttctgctaagacgcaagcg
tcccaggtccgtgcggtccagccgacgtcagagaagaaattatcgatatggcaagagatg
ttcggaaaagctgctttctttgacgacttaacagtttccgaactagaaagaggcacttct
cagacagcgacgacacaggcgtcaggctcacgtatggatatctgggaaggcccaagtcat
acgcttccacctacaggtatgctcttcgatgcgttcatggataaatttctgtcctctcgg
cctgtggaagaagacacccgcgacgagatagatgtgagacgtgatgcgatctcatatgac
gtaccaatggacgagacatctgatctggtcttacccaccgtctcctcccaaggtaggatt
ccggagaaaggggagatggaagaattgcaagagttattcagaagttttgtgatcaagcct
gttggtacacccgataaacgtgtgaacggtaaagtcaacggcaaaccgaatggtcacacc
aatcatgtcaaccttctttcaccaccgtcaagttctctacttgtcagttcaaacgatgag
gacactcgagtggatcctattcccatcacacccgataccacattttcaacgacaaacggt
cttgtgtcagatgacgagagagtgttgactgctgggaagatgaagggaagggggaagaaa
cgtagagcgccgagggaagatgattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (46)   

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