KEGG   Trichechus manatus latirostris (Florida manatee): 101341514
Entry
101341514         CDS       T05135                                 
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X6
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03022  Basal transcription factors
tmu03420  Nucleotide excision repair
tmu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101341514
  09124 Replication and repair
   03420 Nucleotide excision repair
    101341514
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101341514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tmu03021]
    101341514
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101341514
Transcription machinery [BR:tmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101341514
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101341514
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 101341514
NCBI-ProteinID: XP_004385051
UniProt: A0A2Y9E295
Position
Unknown
AA seq 309 aa
MVSDEDELNLLVIIVDTNPIWWGKQALKGSQFTLSKCIDAVMVLGNSHLFMNRSNRLAVI
ASHIHESRFLYPGKNGRLGDFFGEAGNPPSEFNPSGSKDGKYELLTAANEVIAEEIKDLM
TTSDIKGQHMETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMN
VIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRS
QLILPPPIHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKA
KKKKLKVSA
NT seq 930 nt   +upstreamnt  +downstreamnt
atggtctcagacgaagatgaattgaatcttctagtaatcatagttgataccaacccaatt
tggtggggaaagcaagcattaaaaggatctcagttcactttatcaaaatgcatagatgct
gtgatggtgttgggaaattcccatttattcatgaaccgttccaaccgacttgctgtgata
gcaagtcacattcacgaaagtcgattcttatatcctggaaagaatggcaggctgggagac
ttcttcggagaagccggcaaccctccttctgagtttaatccgtcaggaagtaaagacgga
aaatatgagctgttaacagcagcaaatgaagttattgctgaagagatcaaagacctaatg
accacgagtgacataaagggtcaacacatggaaactctgctggcagggtcccttgccaaa
gccctctgctacattcatagaatgaacaaagaagttaaagataatcaggaaatgaagtca
aggatattggtgattaaggctgcagaagacagtgcattgcagtatatgaacttcatgaat
gtaatcttcgcggcccagaaacagaatattttgattgatgcctgtgttttagactctgat
tcaggactcctccaacaggcttgtgacatcacagggggactatacttgaaggtgcctcag
atgccctcccttctgcagtatttgctgtgggttttccttcctgatcaagaccagagatct
cagctaatcctcccgcccccaattcacgttgactatagggctgcctgtttctgtcatcgg
aacctcatcgagatcggctacgtctgttctgtgtgcttgtcaatattctgcaacttcagc
cctatctgtactacatgcgagacagcctttaagatttctctgcctcctgtgctgaaggcc
aagaaaaagaaactgaaagtatctgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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