KEGG   Trichechus manatus latirostris (Florida manatee): 101349706
Entry
101349706         CDS       T05135                                 
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04151  PI3K-Akt signaling pathway
tmu04510  Focal adhesion
tmu04512  ECM-receptor interaction
tmu04820  Cytoskeleton in muscle cells
tmu04926  Relaxin signaling pathway
tmu04933  AGE-RAGE signaling pathway in diabetic complications
tmu04974  Protein digestion and absorption
tmu05146  Amoebiasis
tmu05165  Human papillomavirus infection
tmu05200  Pathways in cancer
tmu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101349706
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101349706
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101349706
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101349706
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    101349706
  09154 Digestive system
   04974 Protein digestion and absorption
    101349706
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101349706
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101349706
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101349706
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101349706
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    101349706
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tmu04147]
    101349706
   00536 Glycosaminoglycan binding proteins [BR:tmu00536]
    101349706
Exosome [BR:tmu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101349706
Glycosaminoglycan binding proteins [BR:tmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101349706
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101349706
NCBI-ProteinID: XP_012411975
UniProt: A0A2Y9FXQ1
Position
Unknown
AA seq 1713 aa
MHAGLWLLLVALCLTEELALAGEKNSYGKLCGGQDCSGGCKCFPEKGARGRPGPIGIQGP
TGPQGFAGPIGLSGLKGERGSPGSLGPYGEKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAAGFPGPDGYPGLLGPPGIPGQKGSKGNPVLAQGTLKGMKGDPGLPGLD
GSTGPKGAPGSPGAVGPRGSPGFQGPPGPPGFSGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPPGFPGIVGPPGIPVIGTTASTGEKGEKGIPGLPG
PRGPMGSEGVQGPPGSQGKKGSSGFPGFNGFPGIKGNKGGIGLPGPDVFIDTEGAVISGY
PGDPGIPGLPGLKGDEGIQGPPGPSGTPGLPPILSAAPGTLGSQGVPGLKGDQGDPGHTT
VGATGLPGRIGLPGLPGPQGPLGPPGPSFEIETLKNAEPGFPGLQGKRGPKGNPGLKGVK
GDSGFCACDGGVPNTGSPGEPGLPGPPGLMGLPGLKGTRGITGSEGAEGPVGAPGLFGPT
GPAGPKGEKGEPTLSTRSGMPGERGDDGPQGLPGETGVPGKDGVPGLPGLPGPPGDARQG
FAGEKGFPGLPGKKGQHGPPGTPGIGLPGSPGPRGLPGDQGIDGLPGEQGLPGLPGDCCC
REKVGKGVVDTEGGITLPCIITGSYGPPGLPGAPGVPGPKGIRGYPGTPGQPGVRGAKGE
SGSAGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGNVGSPGLPGPKGAPGDIFGAEN
GAPGEHGLQGLPGDRGFPGDSGFPGPKGFLGKSGLLGTKGERGSPGAPGRMGQPGPPGPG
GLFGIKGKPGLPGIAGFPGLTGHLGNKGSRGEAGLPGSTGKRGLPGFKGLPGSAGLIGFP
GSPGLPGATGLPGLPGPKGEKGSVGLTGFPGIPGLPGIPGTSGLKGVPGSAGRIGTSGPA
GSPGEKGDRGNPGPVGQPGPRLPMLNLLFKGDKGSPGSAGSDGFPGPRGDKGDAGRPGPP
GLPGAPGFPSSIKGLIGRPGPSGSLGLWGLPGLKGASGIRGFPGMPGETGIQGLNGAPGL
PGVAGLKGSKGDLGQTLEIPGSPGPKGQPGEPGFEGIKGKDGPVGDVGFPGNKGEDGKDG
VSGDTGHPGSPGLPGIAGLRGDPGLPGSPGHPGATGPLGHPGLVGPKGFPGLSGLHGLNG
LPGTKGAHGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKSGVKGQKGGQGFPGLQG
PAGLPGAPGISLPSVIVGQPGDPGRPGLDGERGRPGFPGPRGPPGPASDQGDSGNPGVPG
IPGPQGPKGDQGIPGFSGLPGELGLKGMRGEPGVMGTPGKVGPPGDPGLPGMKGKAGPRG
FSGPQGVPGQTPIAEAIQAPPGPLGLPGIDGIPGLAGDPGAQGPVGPQGSKGLPGISGKD
GPSGLPGPPGVLGDPGVPGLQGPPGFEGAPGKQGPLGRPGMPGQSVNVGYTLVKHSQSEQ
VPLCPVGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARR
NDKSYWLSTTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDVTIPQCPLGWRSLW
IGYSFLMHTAAGAEGGGQALVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVE
ERQQFGEEPVSETLKAGQLHTRVSRCQVCLKSL
NT seq 5142 nt   +upstreamnt  +downstreamnt
atgcatgctgggttgtggctgctcctggttgcgttgtgcctgactgaggaactggcacta
gcgggagagaagaattcctatggaaagctatgcgggggccaagactgcagtgggggctgt
aagtgctttcctgagaaaggggcaagagggcgacctggaccaattggaattcaaggtcca
acaggtcctcaaggatttgctggccctattggtttatcagggttgaaaggagaaaggggc
tccccgggctctctgggaccatatggagaaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcaatgggattccgggccaccctggacagccagggcccagaggccca
cctggtctggatggctgtaatggaactcaaggagctgctggatttccgggccctgatggc
taccctgggcttcttggaccacctggtatccctggtcagaaaggctctaaaggcaatcct
gttcttgcccaaggtactcttaaaggaatgaagggagatcctgggctgcctggactggat
ggaagcactggtccaaaaggagcgcctggatctccaggagccgtaggacccagaggatcc
ccaggctttcaaggtcctccaggtcccccaggtttctctggtcctgatgggaatatggga
ttaggtttccaaggagagaaaggagtcaagggtgatgtgggcctccccggacctgcaggg
ccaccaccatctacgggagagctagagtttatgggttttccaaaaggaaaaaaaggatcc
aagggtgaaccagggcctccgggtttcccaggcatagttggtcctccaggcatcccggta
ataggaaccacagcctctaccggagaaaaaggagaaaagggaatccctggtttgccagga
cctaggggtcccatgggttcagaaggagttcaaggccctccagggagtcagggcaagaag
gggtcctcaggtttccctgggtttaatggattcccaggaattaagggtaataaaggtggc
attggcctgccaggcccggatgttttcattgatacagaaggtgctgtaatatcaggttat
cctggagaccctggtataccaggcctcccaggccttaaaggagatgaaggcatccagggc
ccacctggcccctctggcacccctggcctcccaccaatcttatcagctgccccaggcacc
ctgggctctcagggtgttccaggcctgaagggggaccaaggagacccaggccataccaca
gttggggcaactggcctcccaggcagaattggtttaccaggcctaccaggcccacaaggc
ccactgggaccacctggtccatcatttgagattgaaaccctaaagaacgcagaaccaggg
ttccctggcctccaaggaaaaagaggtccaaaaggaaacccaggcctcaaaggagtaaaa
ggggactcgggtttttgtgcttgtgatggtggtgtccctaacactggatcacctggggaa
ccaggcttgcctgggccaccaggtctcatgggtcttccaggcctcaaaggaacccgaggg
attacaggctctgagggtgcagagggcccagtcggggctccaggtttatttgggcctacc
ggtcctgcaggccccaaaggagagaagggagaaccgactctcagtacaagatcagggatg
ccaggagagcggggtgatgatggcccccaggggctccctggtgagacaggagtcccaggc
aaggacggagtaccaggtttaccaggtctgccaggccctccgggtgatgctagacagggc
tttgctggagaaaaagggttcccaggacttcctggtaaaaaaggccagcatggtccacct
ggcaccccaggaattgggctgccaggatctcctggacctcggggacttcctggagaccaa
ggaatagatggattaccaggagaacaaggtcttcctgggcttccaggtgactgctgctgc
agggagaaggttggtaaaggagtcgtagacacagagggaggaatcacattgccgtgtatt
attactgggtcatatggtccaccaggcctcccaggagctcctggagtcccaggccctaaa
gggatccgtggctaccctgggactccaggccagcctggagtacggggagctaaaggagag
tccggaagtgctggattagttcatctccctgaattgccaggatttcctggacctcgtggg
gagaagggcttgcctgggtttcctgggctccctggaaaagatggcttgcctgggaatgtt
ggcagtccaggtttaccaggtcccaagggagcccctggtgacatctttggtgctgaaaat
ggtgctccaggagagcatggcctccagggattgccaggggacagaggatttcctggagac
tctggctttccaggacccaagggttttcttgggaagtccggcttgctgggcaccaaaggt
gagcggggcagccctggagcaccaggacgaatggggcagccaggccccccagggccaggt
ggcctgtttggcatcaagggaaaacctggtctcccaggaatagcaggctttccaggcttg
acaggacatcttggaaacaaaggctcaagaggtgaagcaggtctcccgggatcaactgga
aagagaggtctgcctgggttcaaaggccttcctggatctgcagggctaataggcttcccg
gggagcccaggcttgccaggggccacagggttgccaggcctcccaggcccaaagggtgag
aaggggtctgttggacttacaggttttccagggataccaggtctccctggtattcctggt
acaagtggattaaagggagtccctgggtcagcaggaagaattggaacatctggacctgct
ggtagccctggtgaaaaaggggacagaggcaatccagggccagtcggacaacccggccca
agactcccaatgctgaatcttttgttcaaaggagacaagggctccccaggctcagctgga
tcagacggatttccagggcccagaggtgacaaaggagacgctggccgccctggaccacca
ggcctccctggagctcccggattccctagctctatcaaaggacttattggaaggccaggc
ccctctggctccttgggactatggggcttgcctggcctgaagggggcctctgggatcaga
ggcttcccgggaatgcctggagaaactggtatacagggtcttaatggggctcccggactc
ccaggagtagctggtctcaaaggttctaaaggagatctaggccagacacttgaaattccc
ggtagcccaggacccaagggacaacctggggagcctggttttgaaggtatcaaaggaaaa
gatggtccagtcggtgatgtaggtttcccgggaaataaaggtgaagatggaaaagatgga
gtttctggagacactggccatcctggctccccaggactccccgggattgcaggactgaga
ggagacccagggcttccaggttctcctggtcatccaggggcaactgggcccctgggacac
cctggcctagtaggacctaaaggcttccctggactttctggtttgcatggattaaatgga
cttccaggcactaagggtgcccatggtactccaggacctagtataactggtgtgcctggg
cctgccggcctgcctggccccaaaggagaaaaaggctctccaggaattggcatcggagcc
ccagggaaatcgggtgtgaaaggacaaaaaggtggccaaggtttcccaggtctccaaggc
cctgctggtctccctggtgccccaggcatctccttgccctcagtcatagtaggacagcct
ggcgaccccgggcgaccaggcctagatggagaacgaggccgcccaggctttcccgggccc
cggggtccccctgggccagcctcggatcaaggcgactccggaaaccctggcgtccctgga
attcctggccctcaagggcccaagggagaccaaggaatcccaggtttctctggtctccct
ggagagctaggactgaaaggcatgagaggtgagcctggcgtcatggggactccaggcaag
gttgggccacctggagacccaggacttcccgggatgaaggggaaggcagggccaagaggc
ttttctggcccccaaggtgttcctggacaaactccaatcgcagaagccatccaggctcct
cctggacctttgggtctaccaggcatcgatggcatccctggccttgcgggggacccaggg
gctcaaggccctgtaggcccacaaggttccaaaggtttacctggcatctctggcaaagat
ggccccagcgggctcccaggccctcctggggttcttggcgatcctggtgtccctggactg
caaggccctccaggatttgaaggagctccagggaagcagggccccttggggaggcctgga
atgcctggccagagcgtgaacgtgggctacaccttggtgaagcacagccagtcggagcag
gtgcccctgtgccctgtcgggatgagccagctgtgggtgggttacagcttgctgtttgtg
gaggggcaggagaaagcccacaaccaggacctggggtttgctggctcctgcctgccccgc
ttcagcaccatgcccttcatctactgcaacatcaatgaagtgtgccactatgccaggcga
aatgataaatcctactggctctccaccactgcccctatccctatgatgcctgtcggccag
actcagattccccagtacatcagccgctgctctgtgtgtgaggcgccctcacaagccatc
gctgtgcacagccaggatgtcaccatcccacagtgccccctaggctggcgcagcctctgg
atcggatattccttcctcatgcacactgccgctggggccgagggtggaggccaggccctg
gtctcacctggctcctgcctagaggactttcgggccactcctttcatcgagtgcagtggt
gcccggggcacttgtcactactttgccaacaagtacagcttctggctgacgacagtggag
gagagacagcagtttggggaggaacctgtgtctgaaacgctgaaagccggacagctccat
actcgggtcagccgctgccaggtgtgtttgaaaagtctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (60)   

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