KEGG   Trichechus manatus latirostris (Florida manatee): 101354240
Entry
101354240         CDS       T05135                                 
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013  Nucleocytoplasmic transport
tmu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101354240
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101354240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101354240
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101354240
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 101354240
NCBI-ProteinID: XP_004371772
UniProt: A0A2Y9DC07
Position
Unknown
AA seq 810 aa
MLYLGTPWELQVPECSALTPTTCSQRADETTVPSMQRRPLFLAPRRALLRRDLLNPRGQF
LESQLPLEDVSVAQFWPTEPVQKKPRRDGLGPGPGFAQAAFEAAPSGPSWGLPPFELRWR
AGALSPPPLRVGAAISMATAASRPSAGGSRDILWRVLGWRIVASIVWSVLLLPICTTIFI
IFSSIDLFHPIQWLSDSFSDLYSSYVVFYLLLLSVVIVIINIFNVEFYTVVPCIPCSRLA
LIGKIVHPQQVLHSFIHASMGMVMAWCAAVITKGQYSFLVVPCTGTESLDSPAAQTCLNE
YHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLV
RNFCILYYFLGHIPKAWISTAMDLRKDKQLHPLDTVSGLLNLSLLYHVWLCGVFLLTTWY
VSWILFKIYATEAHLFPVQPSFAEESDECLPKVLNSNPPLIIKYLALQDLVLLSQYSPSR
RQEVFSLSQPGGHPHNWTAISRECLSLLNDMTQKLVFYQEAAATNGRVISSSYPMEPKKF
NSPEETTFQTPKSSQMTRPSVPPLVKTSLFSSKLSTPDVAGSLGTPFGSSVMNRMAGIFD
VNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSNSFPSTSVSAEGKTVGQPSMIYSWIQN
KREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASYTEDRFGVV
QTTLPAILNSLLTLQEAVDKYFKLPHVSSKPPRISGSLVDTSYKTLRFAFRASLKTAIYR
ITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgctgtaccttggaactccgtgggaactccaagtcccagaatgcagcgctcttactcct
actacttgctctcagagggccgacgagactacagttcccagcatgcagcgtcgccccctg
tttctggcgcctcgcagggccctgcttcgtagggaccttttaaaccccagagggcagttc
ctggagtcacagctccccctggaagacgtatctgtagcgcagttctggcccaccgagcct
gtccagaagaagcctcggagggatgggttggggcctgggccgggcttcgctcaggcagcg
tttgaggcagccccatcggggccctcctggggcctacctccctttgaactgcggtggcgg
gcgggcgcactgtctccaccacccctcagagtaggggccgccatctccatggccacggct
gcgagtcggcctagtgccggcgggtcgcgggacatcctgtggcgcgttttaggctggagg
atagttgcaagtattgtttggtcagtgctgcttctacccatttgtaccacaatatttata
atctttagcagcattgatttatttcatcctatacagtggctgtcagattcttttagtgat
ctgtatagttcgtatgtagtcttttacctcctgctactgtcagtggtaatagtgataata
aatattttcaatgtggagttttatacagttgtgccttgcattccctgctccagactggct
ctgatagggaagatcgttcatcctcagcaggtcttgcactcatttattcatgcttctatg
ggaatggtgatggcctggtgtgctgcagtgataaccaagggccagtacagttttcttgtg
gttccctgcacaggtactgagagcttagatagccctgctgcacagacctgcttaaatgag
tatcacctttttttcctactggctggagcattcatgggctatagctatagccttctgtat
tttgtcaacaacatgaattatcttccatttcccatcatacagcaatacaaattcttgcgc
tttaggaggtctctgcttttactagttaaacatagttgtgtggaatcgctattcctggtt
agaaatttctgcatcttgtattattttctgggccatattcccaaagcttggattagcact
gctatggaccttcggaaagataagcagttacatcctcttgacactgtgagtggtctcttg
aatctctcattactctaccatgtctggctatgtggtgtctttctgctaacaacttggtac
gtctcatggatactcttcaaaatctatgctacagaggctcatctgttccctgttcaacca
tcatttgctgaagagtcagatgaatgcctccctaaagttttaaacagcaatcctcccctc
atcataaagtatttagccttgcaggacctggtgttgctctctcaatattctccttcacga
agacaagaagtttttagtcttagccaaccaggtggacatccccacaactggacagccatt
tcgagggagtgtttgagtcttctaaatgatatgactcagaaattggttttctaccaagaa
gcagctgctacgaatgggagagtgatatcttcatcgtacccaatggaacctaagaaattt
aactctccagaagaaactacttttcagacaccaaaatctagccagatgactcgaccttca
gtgccaccattagttaaaacatcgctgttttcttcaaaattatctacacctgatgttgca
ggttccctgggcactccttttggctctagtgtaatgaaccggatggctggaatttttgat
gtaaacacctgctatgggtcacctcaaagtcctcagctaataagaagagggccaagatta
tggacttctgcatctgatcaacaaatgactgaattttccaattcttttccatctacctct
gttagtgctgagggtaagacagtgggacagcccagtatgatttattcatggatacagaac
aaacgtgaacagattaagaacttcttgtcaaaacgggtgctgataatgtattttttcagt
aagcacccagaggcctccattcaggctgttttttcagacgcccaaatgcatatttgggca
ttagaaggtctgtctcacttagtagcagcatcatatacagaagatagatttggagttgtc
caaactacactaccagctattcttaatagtttgctgacactgcaagaggcagttgacaag
tacttcaagcttcctcatgtttcaagtaaaccacctcggatttcaggaagccttgtggac
acttcttataaaacattaagatttgcatttagagcatcactaaaaactgccatctatcga
ataactactacttttggtgaacatctgaatgctgtgcaagcatctgcagaacatcagaaa
agacttcaacagttcttggagttcaaagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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