KEGG   Trichechus manatus latirostris (Florida manatee): 101355094
Entry
101355094         CDS       T05135                                 
Name
(RefSeq) transcription factor SOX-13
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tmu03000]
    101355094
Transcription factors [BR:tmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    101355094
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 101355094
NCBI-ProteinID: XP_023586088
UniProt: A0A2Y9R3A2
Position
Unknown
AA seq 656 aa
METVGAAHVVPPPPSRPPYFRGLITGPRSWRQVPFLHLPFTMSMRSPVSAQLALDGVGTM
VNCTIKSEEKKETCHEPPQGSAAAAEPQPGDPAQAPQDGADPQAPAQDCSSPERSGSPEP
KRPGAAEAASGSQEKLDFNRNLKEVVPAIEKLLSSDWKERFLGRSSVETKDVKGTQESLA
EKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLI
QQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLQLL
HSPPAPVLKRPGAMAAHHPLQEPSQPLNLTAKPKAPEPPSTSSSPSLKMSNCGPRPPSHG
APTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGVLESSPNTPFRKDLVSLDSS
PAKERLEESCVHPLEEAMLSCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAF
PDMHNSSISKILGSRWKAMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGK
RLRVGEYKALMRTRRQDARQSYVIPPQAGQVQLSSADVLYPRAAGMPLAQPVVEHYVPRS
LDPNMPVIVNTCSLREEGEGAEDRHSVADGEMYRYSEDEDSEGEEKSDGELVVLTD
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggagacggtgggggcagcacacgtggtgccccctccaccaagccggcctccatacttc
cgtgggctcatcaccggcccccgttcctggaggcaagtccccttcctccatctacccttc
acgatgtccatgaggagccccgtctctgcccagctggccctggatggcgttggcaccatg
gtgaactgcaccatcaagtcggaggagaagaaggagacttgccacgagcctccccaggga
tcggctgctgcagctgaaccccagcctggagacccagcccaggcccctcaggatggcgct
gacccccaggctccagcccaggactgtagctctccagagaggagtgggtccccagaaccc
aagagaccaggagccgctgaggctgcttctggaagccaggagaagctggacttcaatcga
aatttaaaagaagttgtgccggccatcgagaaactgctgtccagtgactggaaggagagg
tttctgggaaggagttctgtggagaccaaagatgtcaaagggacccaggagagcctggca
gagaaggagctccagcttttggtcatgatccaccaattgtctacccttcgggaccagctt
ctgacggcccactcagagcagaagaacatggctgccatgctctttgagaagcagcagcag
cagatggagctggcccgacagcagcaggagcagattgctaagcagcagcaacagctaatc
cagcagcagcataagatcaacctccttcagcagcagatacagcaggtcaacatgccttat
gtcatgatcccagccttccctccaagccatcaacctctgcctgtcactcccgattcccag
ctggctttgcctattcagcccatcccctgcaaaccagtggagtatccgctgcagctgctg
cacagtccccctgccccagtgttgaagaggcctggggccatggctgcccaccaccccctg
caggagccctcccagcccctgaacctcacagccaagcccaaggccccagagccgcccagc
acctccagctcccccagcctgaagatgagcaactgcggaccccgcccccccagtcatggg
gcccccacgcgggacctgcaggcgagcccccccagcctgcctctgggcttccttggtgaa
ggggacgccgtcaccaaagccatccaggacgctcgacagctgctgcacggccacagtggg
gtcttggaaagctcccccaacactcccttccgtaaagacctcgtcagcctggactcgtcc
ccagccaaggagcggctggaggagagctgcgtgcaccctctggaagaagccatgctgagc
tgcgacatggacggctcccgccactttcccgagtcccggaacagcagccacatcaagagg
cccatgaacgccttcatggtgtgggccaaggacgagcggcggaagatcctccaagccttc
ccagacatgcacaactccagcatcagcaagatcctcggctcccgctggaaggccatgacc
aaccaggagaagcagccctactatgaggagcaggcgcggctgagccggcagcacctggag
aagtatcctgactacaagtacaagccgaggcccaagcgcacctgcatcgtggagggcaag
cggctgcgcgtgggcgagtacaaggccctgatgaggaccaggcgccaggacgcccgccag
agctacgtgatccccccgcaggccggccaggtgcagctgagctccgcggatgtcctgtac
cctcgggcggcaggcatgcccctagcacagcccgtggtggagcactatgtgccccggagc
ctggaccccaacatgcctgtcattgtcaatacctgcagcctcagagaggagggcgagggc
gctgaggacaggcactcggtggccgatggcgagatgtaccggtacagcgaggatgaagac
tcggagggtgaggagaagagcgatggagagttggtggtgctcacagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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