KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00003877G001
Entry
GSTEN00003877G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K14004  protein transport protein SEC13
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013  Nucleocytoplasmic transport
tng04141  Protein processing in endoplasmic reticulum
tng04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTEN00003877G001
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GSTEN00003877G001
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    GSTEN00003877G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00003877G001
   04131 Membrane trafficking [BR:tng04131]
    GSTEN00003877G001
Messenger RNA biogenesis [BR:tng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTEN00003877G001
Membrane trafficking [BR:tng04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    GSTEN00003877G001
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    GSTEN00003877G001
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    GSTEN00003877G001
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MIOS_WD40
Other DBs
NCBI-ProteinID: CAF89860
UniProt: Q4TB72
Position
11
AA seq 320 aa
QVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGSWDKMFEYTGHESSVNSVCWGPYDFGLLL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWGPAVVPGSLIDQPTGQKPNQVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSSITDTQQNEQ
NT seq 960 nt   +upstreamnt  +downstreamnt
caggtttccgttatcaatacggtggacacctctcacgaggatatgatacacgatgctcag
atggattattacgggacgcgcctcgccacctgctcttccgaccgcaccgtgaagatcttt
gatgtccggaacggtggacagatactggtggcagatctgagaggccacgagggtccggtg
tggcaggttgcctgggctcaccccatgttcggcaacattctggcctcctgctcctacgac
cgcaaagtcatcatctggaaggaggagaacggctcctgggacaagatgtttgagtacacc
ggccacgagtcgtcagtgaattctgtctgctggggtccgtacgacttcggcctgctcctg
gcctgcggcagctccgacggcgccatctctctgctcacgttcaccggcgatcagcagtgg
gatgtgaagaagatcagcaacgcacacaccatcggctgtaacgcggtgagctgggggccg
gccgtcgtgcccggcagcctgatcgaccagcccacgggacagaagccaaaccaggtcaaa
cgcttcgtctccggaggctgcgacaacctggtgaagctctggaaggaggaggacggccag
tggaaggaggaccagaagctggaggcccacagtgactgggtgagggacgtgggctgggcc
ccgtccatcggcctccccaccagcaccatcgccagctgctcccaggacggacgtgtgttc
atctggacgtgcgacgaccctgcaggaaacacctggacggccaagctgctgcacaagttc
aacgatgtggtttggcacgtcagctggtccatcactggcaacatcctggctgtttctggc
ggagacaacaaggtaactctgtggaaggagtccatggacggtcagtgggcctgcatcagc
gacgtcagcaagggccaaggagccgtgtccagcatcacagacacgcagcagaacgagcag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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