KEGG   Thioalkalivibrio nitratireducens: TVNIR_3090
Entry
TVNIR_3090        CDS       T02408                                 
Name
(GenBank) C4-type zinc finger protein, DksA/TraR family
  KO
K06204  RNA polymerase-binding transcription factor
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tni03000]
    TVNIR_3090
   03021 Transcription machinery [BR:tni03021]
    TVNIR_3090
   03009 Ribosome biogenesis [BR:tni03009]
    TVNIR_3090
Transcription factors [BR:tni03000]
 Prokaryotic type
  Other transcription factors
   Others
    TVNIR_3090
Transcription machinery [BR:tni03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     TVNIR_3090
Ribosome biogenesis [BR:tni03009]
 Prokaryotic type
  rRNA transcription factors
   TVNIR_3090
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: AGA34727
UniProt: L0E0F4
Position
3187808..3188260
AA seq 150 aa
MAADQNQAKPSSKHMVASGIAAYEPEAGEEYMSKAQLAHFRELLLAWKQELMEEVERTVG
HMKQDAANFADPADRATQEEEFGLELRARDRERKLCKKIDEALRNIDLGDYGYCEACGVE
IGIRRLEARPTATLCIDCKTLAELKEKQMA
NT seq 453 nt   +upstreamnt  +downstreamnt
atggccgcagaccagaatcaggcgaagccctcctccaagcacatggtggcgagtggcatt
gctgcctacgagccggaagcgggcgaagaatacatgagcaaggcccaactggcacacttc
cgggaactgctgctggcctggaaacaggaactgatggaggaggtcgaacgcaccgtcggt
cacatgaaacaggatgcggccaacttcgccgatcctgcagaccgagcgacccaggaagag
gagttcgggctggagctgcgcgcccgcgaccgcgagcgcaagctgtgcaagaagatcgac
gaagccctgcgcaacatcgacctcggcgattacggatactgcgaagcctgcggagtcgag
atcggcatccggcggctcgaggcgcgccccaccgcaacgctttgcatcgactgcaagacg
ctggccgagctcaaggagaagcagatggcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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