KEGG T01139: Tnap

Thermotoga petrophila RKU-10: Tnap_0094

Entry

Tnap_0094         CDS       T01139

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

tnp Thermotoga petrophila RKU-10

Brite

KEGG Orthology (KO) [BR:tnp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tnp03032]
    Tnap_0094
   03400 DNA repair and recombination proteins [BR:tnp03400]
    Tnap_0094
Enzymes [BR:tnp01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Tnap_0094
DNA replication proteins [BR:tnp03032]
Prokaryotic type
  DNA Topoisomerases
   Tnap_0094
DNA repair and recombination proteins [BR:tnp03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Tnap_0094

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 CofC

Other DBs

NCBI-ProteinID:

ADA66202

UniProt:

D2C5G6

Position

complement(86046..87956)

AA seq 636 aa
MEKYSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVT
LHEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKISGGLHGVGVSV
VNALSEWLEVRVHRDGKIYRQRYERGKPVTPVEVIGETDKHGTIVRFKPDPLIFSETEFD
PDVLEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVKYLNRGKKVFHDVIYMK
RTEKVQTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGTHVTAFKTMLTRLMNEY
GKKHGFLKGDDSFQGEDVREGLTAVVSVYVKNPEFEGQTKSKLGNEEVKEAINRVMRDEL
KKIFDANPELVKTILSKIMSTKQAREAARRAREMVRRKNVLQNTTLPGKLADCSSTDREK
TELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDKLLKNEQISDIIVAVGTG
IGDDFDEGKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIK
AGKEEFYVYSDLELMEYKEKLQGKRIEIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIE
DAEEADRLFEILMGNDPSSRREFIERHALKVKELDI

NT seq 1911 nt +upstreamnt +downstreamnt
atggaaaagtactccgctgaaagtataaaggttttaaaaggactggaacctgtccgaatg
cgacccggaatgtacataggatccacgggcaaacggggattgcatcacctcgtgtacgaa
gtggtggacaacagtgttgatgaggcactcgctggatactgcgactggatacgtgtgact
ctccatgaagatggaagtgtggaagtcgaggacaacggaaggggaatccccgttgacata
catccagaagagggaagaagcgctctggaagtggttttcacagttcttcatgcgggcgga
aaattctccaaggattcctacaagataagcggtggcctgcacggtgttggtgtatcggtg
gtgaacgctctttcggagtggctggaagtgcgggtacatcgtgacgggaagatctacaga
caaagatacgaaaggggtaaaccggtcacacctgtggaagtgataggagaaaccgataag
cacggcacgatcgttcgattcaagcccgatcctctcatattctcagaaacggaattcgat
cctgacgtactggaacacaggttgagagagatagctttcctggtaccggggctcaaaata
gagttcgaagacagaataaatggagagaagaaaaccttcaaattcgacggaggcatagtg
gagtatgtgaagtatctgaaccggggaaagaaggtttttcatgatgtgatatatatgaaa
agaaccgaaaaagtgcaaacgaaaaacggagaagatgaagtgatagtggaaattgccttt
cagtacactgattcgtattctgaagatatcgtgtcttttgcgaacaccataaaaaccgtg
gatggaggaactcatgttacagctttcaaaaccatgcttacaaggctcatgaacgagtat
ggaaaaaaacacggctttcttaaaggggatgattctttccagggtgaagatgtgagagaa
ggtctcacggcggttgtcagcgtttacgtgaaaaaccctgaatttgaaggacaaacgaaa
tcaaaactcggcaatgaagaagtcaaggaagcaataaatagagttatgagagatgagttg
aagaagatattcgacgcgaatcccgagcttgtgaaaactattctttcaaagataatgagc
accaaacaggcaagagaagcggcaagaagagctcgggagatggtgagaaggaaaaacgtt
cttcaaaacacaacgctccccggtaaactggcggattgcagttccacagacagagagaaa
acggagcttttcatcgtggaaggtgactctgccgggggatcggcaaaacaggccagagac
agggaattccaagcggttcttcccatccgaggaaagattttgaacgtggaaaagtcatct
ctcgacaaattgctgaaaaacgagcagatcagtgacataatagtagcggtgggaacaggc
ataggagatgatttcgatgagggtaaactcagatacggcaggatcatcatcatgaccgat
gccgatatagatggtgcacacataagaactctccttctgacactcttctacagatacatg
agacccctcatcgaacagggaagggtatacatagcgcttccacctctgtacagaataaaa
gctggaaaagaagaattctacgtttacagtgatcttgaactgatggaatacaaggaaaaa
ctccagggaaagagaatcgaaattcagagatacaagggactcggagagatgaatcctgag
cagctctgggaaacaacgatgaatccagaaacgagaaaaatcataagggtaactatagaa
gatgccgaagaagcggatagactctttgaaattctcatgggtaacgatccatccagtaga
agggagttcatagaaaggcacgctctgaaagtgaaagaactggatatctag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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