KEGG   Thermosediminibacter oceani: Toce_1310
Entry
Toce_1310         CDS       T01289                                 
Name
(GenBank) Exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
toc  Thermosediminibacter oceani
Pathway
toc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:toc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Toce_1310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:toc03400]
    Toce_1310
Enzymes [BR:toc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Toce_1310
DNA repair and recombination proteins [BR:toc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Toce_1310
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Membrane_bind
Other DBs
NCBI-ProteinID: ADL08065
UniProt: D9S3T8
Position
complement(1275373..1276605)
AA seq 410 aa
MAAPVLTVSELTGIIKYLFDSNEILRQVYVRGEISNFKYHLSGHIYFVLKDEKAQIRCVM
FKNKSVLLPFMPENGMRVVAFGYVTVYEKNGEYQLYVDDMEPDGIGALYLAYEKLKAKLQ
KEGLFDANRKKAIPFLPKNIGIITSINGAAIKDLLTVIRRRFPNVNILIAPVSVQGKQAA
DEICEAIKDLNRIGKLDVIIVARGGGSIEELWTFNEEKVARAIYSSRIPIISAVGHETDY
TIADFVADKRAPTPSAAGEMVVPEKNQLLADIDQRKKRIIAAMCAFLNTRKQGIEYIRRS
VVFRKLRSEVDNNRIQLDVLTRRLLRETMNQITVKKSALKSLMGRLDVLSPLSVLDRGYS
ICQTIDDLRIVKRVEEVSSGEEVKVILSNGYLLCEVRSKGKKVVRENGRV
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggctgcgcctgtattgacggtcagtgagctgacgggtataattaaatacttgttcgat
tccaacgaaatcttgcgccaggtgtacgtcagaggtgagatttcaaattttaaataccat
ctttcggggcacatttactttgtccttaaggatgagaaagctcaaatccggtgcgtaatg
tttaaaaacaagagcgtattactacctttcatgccggaaaacggaatgagggttgtggcc
tttggatacgtaacagtatacgaaaaaaacggggaatatcaattgtatgtggacgatatg
gaacccgacggtatcggtgcgctttacctggcgtatgagaaattaaaagcaaaactacaa
aaagaaggattattcgatgctaatagaaaaaaagccataccatttctgccgaaaaatata
gggattattacttcgataaacggtgcagctattaaggatttgcttaccgtcatcaggaga
aggtttcccaatgtcaacatccttatagctcctgtttcggtgcagggcaaacaggctgct
gacgaaatatgcgaggcaataaaagacctaaacaggatagggaaactggatgttataatt
gtggctaggggaggaggttccatagaggagctctggacttttaatgaagaaaaggtggcc
cgggcgatatacagttccagaatcccaataatatcggcagtagggcacgagaccgattat
acaatagccgattttgtggctgataaaagggctccaacgccttctgcagccggggaaatg
gtggtgcccgaaaaaaaccagctgctcgccgatatagatcagaggaaaaaaaggataatt
gctgctatgtgcgcctttttaaataccaggaagcagggaatagaatacataagaaggtcg
gtagtcttcagaaaactgaggtcggaagtagacaataacagaatacaactggatgtcctg
actagaaggcttttgagagaaactatgaaccaaataactgtcaaaaagtccgctctaaag
agtctaatggggaggcttgatgttttaagcccgctttccgtgctggacaggggttacagt
atatgccagaccattgacgatctaaggatcgtgaaaagggtggaggaagtatcttcgggc
gaagaagtaaaggttattctttccaacggttacctcttgtgcgaggtcagaagcaaggga
aagaaggtggtgcgcgaaaatggcagagtataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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