KEGG   Thalassolituus oleivorans MIL-1: TOL_0003
Entry
TOL_0003          CDS       T02529                                 
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
tol  Thalassolituus oleivorans MIL-1
Pathway
tol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TOL_0003 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tol03400]
    TOL_0003 (recF)
DNA repair and recombination proteins [BR:tol03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TOL_0003 (recF)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_13 AAA_21 AAA_15 AAA_27 AAA_29 ABC_tran AAA_16 NACHT nSTAND3 ATPase_2 DUF2813 Bac_DnaA MobB AAA BrxC_BrxD AAA_22 AAA_5
Other DBs
NCBI-ProteinID: CCU70452
UniProt: M5DN01
Position
2756..3838
AA seq 360 aa
MPIRQLQISGVRNLQPLTITPHSGVNFIYGENGSGKTSILEAIAVMAAGKSFRTSQLKHV
MSHDADRMELRMSIEDLHRGECELDSLRLKGGDHLLKQNGSVLTSQAEAAHWLPVQIIEP
NTFKLLAGSPEERRQFIDWGVFHVEHGFMDQWKTFRKQLKQRNAVLKQKESEWLSVWNAG
FVESALTIDKHRRDYLKRFKPEFERILTALDPDVDVTLAYFPGWDKDSELGDVLTRQQER
DLALGYTQSGPHRAELRIKCDKQPAAEILSRGQQKTVVAALKIAQGSLFQQESDRRTIYL
VDDLASELDEKHRFALCKLLEDLKCQVFITSIDKDKLTDVWQPVASKVFHVEHGRLTEEA
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcctattcggcaacttcaaatcagcggcgtgcgcaacttacagccgctgaccataacc
ccgcatagcggggttaatttcatttatggcgagaacggttctggcaagacgagcatactc
gaagccattgcggtcatggctgccggcaagtcgtttcgtacctctcagcttaaacatgtt
atgagtcacgatgctgatcgcatggaattgcgcatgagcattgaagacctgcatcgcggc
gagtgcgagctagatagtttgcgcttaaagggaggggatcatttgctgaagcaaaatggt
tctgttctcacgtctcaggccgaagcggcacattggttaccggttcagatcatagagcca
aatacattcaagttattggctggctctccagaagaacggcgacagtttattgattgggga
gtgttccacgtggaacacggcttcatggatcagtggaagacctttcgcaaacagctgaaa
caacgcaatgccgttctcaagcaaaaagagagcgaatggctgagcgtttggaacgctgga
tttgtggagagcgcccttaccatcgacaaacacagaagagactaccttaagcgttttaag
cccgaatttgagcgtattcttaccgctcttgatcctgatgtagacgtcaccttggcgtat
tttccgggatgggacaaagattcggaactgggcgatgtactaacacgtcagcaagaacga
gatctcgctttagggtacactcagtcagggccacacagagctgagctgcgcatcaaatgc
gataagcaaccggctgccgagatcttatcgcgcggacagcaaaaaacagtggtggcggct
cttaagattgctcaaggttcattgtttcaacaagagagtgatcgacgcactatctaccta
gtggatgatctcgcgtcagaattggatgaaaagcaccgttttgctttatgcaaactgcta
gaagatttaaaatgtcaggtctttattaccagcatcgataaagacaagctgaccgatgta
tggcagcccgttgccagtaaagtgttccacgtggaacacggacgtttaacagaagaagcg
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (99)   
   KEGG ORTHOLOGY (1)   
   RefGene (96)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (123)   

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